Gene : GER1 A. thaliana TAIR10
Primary Identifier:  ? AT1G72610 Defline:  (1 of 2) PTHR31238//PTHR31238:SF21 - FAMILY NOT NAMED // GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3
Genomic Order:  6219 Name:  ? AT1G72610
Secondary Identifier:  ? PAC:19654636
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G72610 0.5kb upstream 0.5kb upstream 1431 true Chr1: 27339114-27340544 Arabidopsis thaliana
AT1G72610 0.5kb upstream 0.5kb upstream 500 false Chr1: 27340045-27340544 Arabidopsis thaliana
AT1G72610 0.5kb downstream 0.5kb downstream 1431 true Chr1: 27338614-27340044 Arabidopsis thaliana
AT1G72610 0.5kb downstream 0.5kb downstream 500 false Chr1: 27338614-27339113 Arabidopsis thaliana
AT1G72610 1.0kb upstream 1.0kb upstream 1931 true Chr1: 27339114-27341044 Arabidopsis thaliana
AT1G72610 1.0kb upstream 1.0kb upstream 1000 false Chr1: 27340045-27341044 Arabidopsis thaliana
AT1G72610 1.0kb downstream 1.0kb downstream 1931 true Chr1: 27338114-27340044 Arabidopsis thaliana
AT1G72610 1.0kb downstream 1.0kb downstream 1000 false Chr1: 27338114-27339113 Arabidopsis thaliana
AT1G72610 2.0kb upstream 2.0kb upstream 2931 true Chr1: 27339114-27342044 Arabidopsis thaliana
AT1G72610 2.0kb upstream 2.0kb upstream 2000 false Chr1: 27340045-27342044 Arabidopsis thaliana
AT1G72610 2.0kb downstream 2.0kb downstream 2931 true Chr1: 27337114-27340044 Arabidopsis thaliana
AT1G72610 2.0kb downstream 2.0kb downstream 2000 false Chr1: 27337114-27339113 Arabidopsis thaliana
AT1G72610 5.0kb upstream 5.0kb upstream 5931 true Chr1: 27339114-27345044 Arabidopsis thaliana
AT1G72610 5.0kb upstream 5.0kb upstream 5000 false Chr1: 27340045-27345044 Arabidopsis thaliana
AT1G72610 5.0kb downstream 5.0kb downstream 5931 true Chr1: 27334114-27340044 Arabidopsis thaliana
AT1G72610 5.0kb downstream 5.0kb downstream 5000 false Chr1: 27334114-27339113 Arabidopsis thaliana
AT1G72610 10.0kb upstream 10.0kb upstream 10931 true Chr1: 27339114-27350044 Arabidopsis thaliana
AT1G72610 10.0kb upstream 10.0kb upstream 10000 false Chr1: 27340045-27350044 Arabidopsis thaliana
AT1G72610 10.0kb downstream 10.0kb downstream 10931 true Chr1: 27329114-27340044 Arabidopsis thaliana
AT1G72610 10.0kb downstream 10.0kb downstream 10000 false Chr1: 27329114-27339113 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368956 5261 Brassicaceae View MSA
123836089 5264 Brassicales-Malvales View MSA
124348843 5266 SBM View MSA
124248046 5268 Malvidae View MSA
124066370 5270 Rosid View MSA
123751196 5271 Pentapetalae View MSA
122788614 5272 Eudicot View MSA
122044188 5273 Angiosperm View MSA
121352324 5274 Embryophyte View MSA
123427618 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1459.691     High High
cufflinks 0.276     Low  
cufflinks 763.712     High  
cufflinks 0.329     Low  
cufflinks 574.056     High  
cufflinks 0.299     Low  

0 Strain