Gene : GER3 A. thaliana TAIR10
Primary Identifier:  ? AT5G20630 Defline:  (1 of 2) PTHR31238//PTHR31238:SF21 - FAMILY NOT NAMED // GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3
Genomic Order:  1998 Name:  ? AT5G20630
Secondary Identifier:  ? PAC:19671045
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G20630 0.5kb upstream 0.5kb upstream 1390 true Chr5: 6975104-6976493 Arabidopsis thaliana
AT5G20630 0.5kb upstream 0.5kb upstream 500 false Chr5: 6975994-6976493 Arabidopsis thaliana
AT5G20630 0.5kb downstream 0.5kb downstream 1390 true Chr5: 6974604-6975993 Arabidopsis thaliana
AT5G20630 0.5kb downstream 0.5kb downstream 500 false Chr5: 6974604-6975103 Arabidopsis thaliana
AT5G20630 1.0kb upstream 1.0kb upstream 1890 true Chr5: 6975104-6976993 Arabidopsis thaliana
AT5G20630 1.0kb upstream 1.0kb upstream 1000 false Chr5: 6975994-6976993 Arabidopsis thaliana
AT5G20630 1.0kb downstream 1.0kb downstream 1890 true Chr5: 6974104-6975993 Arabidopsis thaliana
AT5G20630 1.0kb downstream 1.0kb downstream 1000 false Chr5: 6974104-6975103 Arabidopsis thaliana
AT5G20630 2.0kb upstream 2.0kb upstream 2890 true Chr5: 6975104-6977993 Arabidopsis thaliana
AT5G20630 2.0kb upstream 2.0kb upstream 2000 false Chr5: 6975994-6977993 Arabidopsis thaliana
AT5G20630 2.0kb downstream 2.0kb downstream 2890 true Chr5: 6973104-6975993 Arabidopsis thaliana
AT5G20630 2.0kb downstream 2.0kb downstream 2000 false Chr5: 6973104-6975103 Arabidopsis thaliana
AT5G20630 5.0kb upstream 5.0kb upstream 5890 true Chr5: 6975104-6980993 Arabidopsis thaliana
AT5G20630 5.0kb upstream 5.0kb upstream 5000 false Chr5: 6975994-6980993 Arabidopsis thaliana
AT5G20630 5.0kb downstream 5.0kb downstream 5890 true Chr5: 6970104-6975993 Arabidopsis thaliana
AT5G20630 5.0kb downstream 5.0kb downstream 5000 false Chr5: 6970104-6975103 Arabidopsis thaliana
AT5G20630 10.0kb upstream 10.0kb upstream 10890 true Chr5: 6975104-6985993 Arabidopsis thaliana
AT5G20630 10.0kb upstream 10.0kb upstream 10000 false Chr5: 6975994-6985993 Arabidopsis thaliana
AT5G20630 10.0kb downstream 10.0kb downstream 10890 true Chr5: 6965104-6975993 Arabidopsis thaliana
AT5G20630 10.0kb downstream 10.0kb downstream 10000 false Chr5: 6965104-6975103 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379167 5261 Brassicaceae View MSA
123833527 5264 Brassicales-Malvales View MSA
124348843 5266 SBM View MSA
124248046 5268 Malvidae View MSA
124066370 5270 Rosid View MSA
123751196 5271 Pentapetalae View MSA
122788614 5272 Eudicot View MSA
122044188 5273 Angiosperm View MSA
121352324 5274 Embryophyte View MSA
123427618 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 413.086     High  
cufflinks 0.051     Low  
cufflinks 508.828     High High
cufflinks 0.085     Low  
cufflinks 114.567     High  
cufflinks 0.107     Low  

0 Strain