Gene : Araha.36294s0002 A. halleri v1.1
Defline:  (1 of 2) PTHR22572:SF101 - GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE SMALL SUBUNIT, CHLOROPLASTIC Genomic Order:  2
Name:  ? Araha.36294s0002 Secondary Identifier:  ? PAC:28846901
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri GLYCOGENSYNTH-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-622 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.36294s0002 0.5kb upstream 0.5kb upstream 2881 true Scaffold36294: 17972-20852 Arabidopsis halleri
Araha.36294s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold36294: 17972-18471 Arabidopsis halleri
Araha.36294s0002 0.5kb downstream 0.5kb downstream 2623 true Scaffold36294: 18472-21094 Arabidopsis halleri
Araha.36294s0002 0.5kb downstream 0.5kb downstream 242 false Scaffold36294: 20853-21094 Arabidopsis halleri
Araha.36294s0002 1.0kb upstream 1.0kb upstream 3381 true Scaffold36294: 17472-20852 Arabidopsis halleri
Araha.36294s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold36294: 17472-18471 Arabidopsis halleri
Araha.36294s0002 1.0kb downstream 1.0kb downstream 2623 true Scaffold36294: 18472-21094 Arabidopsis halleri
Araha.36294s0002 1.0kb downstream 1.0kb downstream 242 false Scaffold36294: 20853-21094 Arabidopsis halleri
Araha.36294s0002 2.0kb upstream 2.0kb upstream 4381 true Scaffold36294: 16472-20852 Arabidopsis halleri
Araha.36294s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold36294: 16472-18471 Arabidopsis halleri
Araha.36294s0002 2.0kb downstream 2.0kb downstream 2623 true Scaffold36294: 18472-21094 Arabidopsis halleri
Araha.36294s0002 2.0kb downstream 2.0kb downstream 242 false Scaffold36294: 20853-21094 Arabidopsis halleri
Araha.36294s0002 5.0kb upstream 5.0kb upstream 7381 true Scaffold36294: 13472-20852 Arabidopsis halleri
Araha.36294s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold36294: 13472-18471 Arabidopsis halleri
Araha.36294s0002 5.0kb downstream 5.0kb downstream 2623 true Scaffold36294: 18472-21094 Arabidopsis halleri
Araha.36294s0002 5.0kb downstream 5.0kb downstream 242 false Scaffold36294: 20853-21094 Arabidopsis halleri
Araha.36294s0002 10.0kb upstream 10.0kb upstream 12381 true Scaffold36294: 8472-20852 Arabidopsis halleri
Araha.36294s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold36294: 8472-18471 Arabidopsis halleri
Araha.36294s0002 10.0kb downstream 10.0kb downstream 2623 true Scaffold36294: 18472-21094 Arabidopsis halleri
Araha.36294s0002 10.0kb downstream 10.0kb downstream 242 false Scaffold36294: 20853-21094 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365364 5261 Brassicaceae View MSA
123836919 5264 Brassicales-Malvales View MSA
124346329 5266 SBM View MSA
124239749 5268 Malvidae View MSA
124067564 5270 Rosid View MSA
123737587 5271 Pentapetalae View MSA
122787627 5272 Eudicot View MSA
122044250 5273 Angiosperm View MSA
121350002 5274 Embryophyte View MSA
123424956 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain