Gene : Araha.36627s0001 A. halleri v1.1

Defline:  (1 of 2) PTHR11562:SF31 - RE54080P Genomic Order:  1
Name:  ? Araha.36627s0001 Secondary Identifier:  ? PAC:28840884

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.36627s0001 0.5kb upstream 0.5kb upstream 2092 true Scaffold36627: 303-2394 Arabidopsis halleri
Araha.36627s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold36627: 303-802 Arabidopsis halleri
Araha.36627s0001 0.5kb downstream 0.5kb downstream 2092 true Scaffold36627: 803-2894 Arabidopsis halleri
Araha.36627s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold36627: 2395-2894 Arabidopsis halleri
Araha.36627s0001 1.0kb upstream 1.0kb upstream 2394 true Scaffold36627: 1-2394 Arabidopsis halleri
Araha.36627s0001 1.0kb upstream 1.0kb upstream 802 false Scaffold36627: 1-802 Arabidopsis halleri
Araha.36627s0001 1.0kb downstream 1.0kb downstream 2592 true Scaffold36627: 803-3394 Arabidopsis halleri
Araha.36627s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold36627: 2395-3394 Arabidopsis halleri
Araha.36627s0001 2.0kb upstream 2.0kb upstream 2394 true Scaffold36627: 1-2394 Arabidopsis halleri
Araha.36627s0001 2.0kb upstream 2.0kb upstream 802 false Scaffold36627: 1-802 Arabidopsis halleri
Araha.36627s0001 2.0kb downstream 2.0kb downstream 3592 true Scaffold36627: 803-4394 Arabidopsis halleri
Araha.36627s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold36627: 2395-4394 Arabidopsis halleri
Araha.36627s0001 5.0kb upstream 5.0kb upstream 2394 true Scaffold36627: 1-2394 Arabidopsis halleri
Araha.36627s0001 5.0kb upstream 5.0kb upstream 802 false Scaffold36627: 1-802 Arabidopsis halleri
Araha.36627s0001 5.0kb downstream 5.0kb downstream 6592 true Scaffold36627: 803-7394 Arabidopsis halleri
Araha.36627s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold36627: 2395-7394 Arabidopsis halleri
Araha.36627s0001 10.0kb upstream 10.0kb upstream 2394 true Scaffold36627: 1-2394 Arabidopsis halleri
Araha.36627s0001 10.0kb upstream 10.0kb upstream 802 false Scaffold36627: 1-802 Arabidopsis halleri
Araha.36627s0001 10.0kb downstream 10.0kb downstream 10936 true Scaffold36627: 803-11738 Arabidopsis halleri
Araha.36627s0001 10.0kb downstream 10.0kb downstream 9344 false Scaffold36627: 2395-11738 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343662 5261 Brassicaceae View MSA
123783792 5264 Brassicales-Malvales View MSA
124351055 5266 SBM View MSA
124247000 5268 Malvidae View MSA
124072009 5270 Rosid View MSA
123747462 5271 Pentapetalae View MSA
122791570 5272 Eudicot View MSA
122042960 5273 Angiosperm View MSA
121349526 5274 Embryophyte View MSA
123427530 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain