Gene : Araha.43972s0001 A. halleri v1.1
Defline:  (1 of 1) PTHR10742:SF228 - POLYAMINE OXIDASE 4-RELATED Genomic Order:  1
Name:  ? Araha.43972s0001 Secondary Identifier:  ? PAC:28851762
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-6441 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.43972s0001 0.5kb upstream 0.5kb upstream 3675 true Scaffold43972: 3334-7008 Arabidopsis halleri
Araha.43972s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold43972: 6509-7008 Arabidopsis halleri
Araha.43972s0001 0.5kb downstream 0.5kb downstream 3675 true Scaffold43972: 2834-6508 Arabidopsis halleri
Araha.43972s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold43972: 2834-3333 Arabidopsis halleri
Araha.43972s0001 1.0kb upstream 1.0kb upstream 4175 true Scaffold43972: 3334-7508 Arabidopsis halleri
Araha.43972s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold43972: 6509-7508 Arabidopsis halleri
Araha.43972s0001 1.0kb downstream 1.0kb downstream 4175 true Scaffold43972: 2334-6508 Arabidopsis halleri
Araha.43972s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold43972: 2334-3333 Arabidopsis halleri
Araha.43972s0001 2.0kb upstream 2.0kb upstream 5175 true Scaffold43972: 3334-8508 Arabidopsis halleri
Araha.43972s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold43972: 6509-8508 Arabidopsis halleri
Araha.43972s0001 2.0kb downstream 2.0kb downstream 5175 true Scaffold43972: 1334-6508 Arabidopsis halleri
Araha.43972s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold43972: 1334-3333 Arabidopsis halleri
Araha.43972s0001 5.0kb upstream 5.0kb upstream 8175 true Scaffold43972: 3334-11508 Arabidopsis halleri
Araha.43972s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold43972: 6509-11508 Arabidopsis halleri
Araha.43972s0001 5.0kb downstream 5.0kb downstream 6508 true Scaffold43972: 1-6508 Arabidopsis halleri
Araha.43972s0001 5.0kb downstream 5.0kb downstream 3333 false Scaffold43972: 1-3333 Arabidopsis halleri
Araha.43972s0001 10.0kb upstream 10.0kb upstream 13175 true Scaffold43972: 3334-16508 Arabidopsis halleri
Araha.43972s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold43972: 6509-16508 Arabidopsis halleri
Araha.43972s0001 10.0kb downstream 10.0kb downstream 6508 true Scaffold43972: 1-6508 Arabidopsis halleri
Araha.43972s0001 10.0kb downstream 10.0kb downstream 3333 false Scaffold43972: 1-3333 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366027 5261 Brassicaceae View MSA
123835640 5264 Brassicales-Malvales View MSA
124336999 5266 SBM View MSA
124238146 5268 Malvidae View MSA
124061702 5270 Rosid View MSA
123740363 5271 Pentapetalae View MSA
122792459 5272 Eudicot View MSA
122049478 5273 Angiosperm View MSA
121311425 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain