Gene : Araha.46068s0001 A. halleri v1.1
Defline:  (1 of 2) PTHR31642:SF6 - HXXXD-TYPE ACYL-TRANSFERASE-RELATED Genomic Order:  1
Name:  ? Araha.46068s0001 Secondary Identifier:  ? PAC:28863583
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-4203 Arabidopsis halleri pathologic  
Ahalleri PWY-5835 Arabidopsis halleri pathologic  
Ahalleri PWY-6801 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.46068s0001 0.5kb upstream 0.5kb upstream 2174 true Scaffold46068: 1241-3414 Arabidopsis halleri
Araha.46068s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold46068: 1241-1740 Arabidopsis halleri
Araha.46068s0001 0.5kb downstream 0.5kb downstream 2174 true Scaffold46068: 1741-3914 Arabidopsis halleri
Araha.46068s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold46068: 3415-3914 Arabidopsis halleri
Araha.46068s0001 1.0kb upstream 1.0kb upstream 2674 true Scaffold46068: 741-3414 Arabidopsis halleri
Araha.46068s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold46068: 741-1740 Arabidopsis halleri
Araha.46068s0001 1.0kb downstream 1.0kb downstream 2674 true Scaffold46068: 1741-4414 Arabidopsis halleri
Araha.46068s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold46068: 3415-4414 Arabidopsis halleri
Araha.46068s0001 2.0kb upstream 2.0kb upstream 3414 true Scaffold46068: 1-3414 Arabidopsis halleri
Araha.46068s0001 2.0kb upstream 2.0kb upstream 1740 false Scaffold46068: 1-1740 Arabidopsis halleri
Araha.46068s0001 2.0kb downstream 2.0kb downstream 3674 true Scaffold46068: 1741-5414 Arabidopsis halleri
Araha.46068s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold46068: 3415-5414 Arabidopsis halleri
Araha.46068s0001 5.0kb upstream 5.0kb upstream 3414 true Scaffold46068: 1-3414 Arabidopsis halleri
Araha.46068s0001 5.0kb upstream 5.0kb upstream 1740 false Scaffold46068: 1-1740 Arabidopsis halleri
Araha.46068s0001 5.0kb downstream 5.0kb downstream 6674 true Scaffold46068: 1741-8414 Arabidopsis halleri
Araha.46068s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold46068: 3415-8414 Arabidopsis halleri
Araha.46068s0001 10.0kb upstream 10.0kb upstream 3414 true Scaffold46068: 1-3414 Arabidopsis halleri
Araha.46068s0001 10.0kb upstream 10.0kb upstream 1740 false Scaffold46068: 1-1740 Arabidopsis halleri
Araha.46068s0001 10.0kb downstream 10.0kb downstream 9857 true Scaffold46068: 1741-11597 Arabidopsis halleri
Araha.46068s0001 10.0kb downstream 10.0kb downstream 8183 false Scaffold46068: 3415-11597 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366246 5261 Brassicaceae View MSA
123831825 5264 Brassicales-Malvales View MSA
124349768 5266 SBM View MSA
124247936 5268 Malvidae View MSA
124064469 5270 Rosid View MSA
123743346 5271 Pentapetalae View MSA
122797720 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain