Gene : Araha.45747s0002 A. halleri v1.1
Defline:  (1 of 1) PTHR10836:SF39 - GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE GAPB, CHLOROPLASTIC Genomic Order:  2
Name:  ? Araha.45747s0002 Secondary Identifier:  ? PAC:28841990
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri CALVIN-PWY Arabidopsis halleri pathologic  
Ahalleri PHOTOALL-PWY Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.45747s0002 0.5kb upstream 0.5kb upstream 2908 true Scaffold45747: 974-3881 Arabidopsis halleri
Araha.45747s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold45747: 974-1473 Arabidopsis halleri
Araha.45747s0002 0.5kb downstream 0.5kb downstream 2908 true Scaffold45747: 1474-4381 Arabidopsis halleri
Araha.45747s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold45747: 3882-4381 Arabidopsis halleri
Araha.45747s0002 1.0kb upstream 1.0kb upstream 3408 true Scaffold45747: 474-3881 Arabidopsis halleri
Araha.45747s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold45747: 474-1473 Arabidopsis halleri
Araha.45747s0002 1.0kb downstream 1.0kb downstream 3408 true Scaffold45747: 1474-4881 Arabidopsis halleri
Araha.45747s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold45747: 3882-4881 Arabidopsis halleri
Araha.45747s0002 2.0kb upstream 2.0kb upstream 3881 true Scaffold45747: 1-3881 Arabidopsis halleri
Araha.45747s0002 2.0kb upstream 2.0kb upstream 1473 false Scaffold45747: 1-1473 Arabidopsis halleri
Araha.45747s0002 2.0kb downstream 2.0kb downstream 4273 true Scaffold45747: 1474-5746 Arabidopsis halleri
Araha.45747s0002 2.0kb downstream 2.0kb downstream 1865 false Scaffold45747: 3882-5746 Arabidopsis halleri
Araha.45747s0002 5.0kb upstream 5.0kb upstream 3881 true Scaffold45747: 1-3881 Arabidopsis halleri
Araha.45747s0002 5.0kb upstream 5.0kb upstream 1473 false Scaffold45747: 1-1473 Arabidopsis halleri
Araha.45747s0002 5.0kb downstream 5.0kb downstream 4273 true Scaffold45747: 1474-5746 Arabidopsis halleri
Araha.45747s0002 5.0kb downstream 5.0kb downstream 1865 false Scaffold45747: 3882-5746 Arabidopsis halleri
Araha.45747s0002 10.0kb upstream 10.0kb upstream 3881 true Scaffold45747: 1-3881 Arabidopsis halleri
Araha.45747s0002 10.0kb upstream 10.0kb upstream 1473 false Scaffold45747: 1-1473 Arabidopsis halleri
Araha.45747s0002 10.0kb downstream 10.0kb downstream 4273 true Scaffold45747: 1474-5746 Arabidopsis halleri
Araha.45747s0002 10.0kb downstream 10.0kb downstream 1865 false Scaffold45747: 3882-5746 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369088 5261 Brassicaceae View MSA
123835390 5264 Brassicales-Malvales View MSA
124344807 5266 SBM View MSA
124241337 5268 Malvidae View MSA
124062072 5270 Rosid View MSA
123746514 5271 Pentapetalae View MSA
122796484 5272 Eudicot View MSA
122047323 5273 Angiosperm View MSA
121310728 5274 Embryophyte View MSA
123425156 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain