Gene : Araha.51737s0001 A. halleri v1.1
Defline:  (1 of 2) 2.6.1.11 - Acetylornithine transaminase / Succinylornithine aminotransferase Genomic Order:  1
Name:  ? Araha.51737s0001 Secondary Identifier:  ? PAC:28858515
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri ARGSYNBSUB-PWY Arabidopsis halleri pathologic  
Ahalleri ARGSYN-PWY Arabidopsis halleri pathologic  
Ahalleri GLUTORN-PWY Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.51737s0001 0.5kb upstream 0.5kb upstream 2557 true Scaffold51737: 413-2969 Arabidopsis halleri
Araha.51737s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold51737: 2470-2969 Arabidopsis halleri
Araha.51737s0001 0.5kb downstream 0.5kb downstream 2469 true Scaffold51737: 1-2469 Arabidopsis halleri
Araha.51737s0001 0.5kb downstream 0.5kb downstream 412 false Scaffold51737: 1-412 Arabidopsis halleri
Araha.51737s0001 1.0kb upstream 1.0kb upstream 3057 true Scaffold51737: 413-3469 Arabidopsis halleri
Araha.51737s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold51737: 2470-3469 Arabidopsis halleri
Araha.51737s0001 1.0kb downstream 1.0kb downstream 2469 true Scaffold51737: 1-2469 Arabidopsis halleri
Araha.51737s0001 1.0kb downstream 1.0kb downstream 412 false Scaffold51737: 1-412 Arabidopsis halleri
Araha.51737s0001 2.0kb upstream 2.0kb upstream 4057 true Scaffold51737: 413-4469 Arabidopsis halleri
Araha.51737s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold51737: 2470-4469 Arabidopsis halleri
Araha.51737s0001 2.0kb downstream 2.0kb downstream 2469 true Scaffold51737: 1-2469 Arabidopsis halleri
Araha.51737s0001 2.0kb downstream 2.0kb downstream 412 false Scaffold51737: 1-412 Arabidopsis halleri
Araha.51737s0001 5.0kb upstream 5.0kb upstream 4974 true Scaffold51737: 413-5386 Arabidopsis halleri
Araha.51737s0001 5.0kb upstream 5.0kb upstream 2917 false Scaffold51737: 2470-5386 Arabidopsis halleri
Araha.51737s0001 5.0kb downstream 5.0kb downstream 2469 true Scaffold51737: 1-2469 Arabidopsis halleri
Araha.51737s0001 5.0kb downstream 5.0kb downstream 412 false Scaffold51737: 1-412 Arabidopsis halleri
Araha.51737s0001 10.0kb upstream 10.0kb upstream 4974 true Scaffold51737: 413-5386 Arabidopsis halleri
Araha.51737s0001 10.0kb upstream 10.0kb upstream 2917 false Scaffold51737: 2470-5386 Arabidopsis halleri
Araha.51737s0001 10.0kb downstream 10.0kb downstream 2469 true Scaffold51737: 1-2469 Arabidopsis halleri
Araha.51737s0001 10.0kb downstream 10.0kb downstream 412 false Scaffold51737: 1-412 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372513 5261 Brassicaceae View MSA
123839882 5264 Brassicales-Malvales View MSA
124344979 5266 SBM View MSA
124239289 5268 Malvidae View MSA
124071750 5270 Rosid View MSA
123736750 5271 Pentapetalae View MSA
122787472 5272 Eudicot View MSA
122044767 5273 Angiosperm View MSA
121344135 5274 Embryophyte View MSA
123424486 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain