Gene : Araha.53436s0001 A. halleri v1.1
Defline:  (1 of 4) PTHR23086:SF33 - PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 1-RELATED Genomic Order:  1
Name:  ? Araha.53436s0001 Secondary Identifier:  ? PAC:28855959
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-6351 Arabidopsis halleri pathologic  
Ahalleri PWY-6352 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.53436s0001 0.5kb upstream 0.5kb upstream 4692 true Scaffold53436: 2185-6876 Arabidopsis halleri
Araha.53436s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold53436: 6377-6876 Arabidopsis halleri
Araha.53436s0001 0.5kb downstream 0.5kb downstream 4692 true Scaffold53436: 1685-6376 Arabidopsis halleri
Araha.53436s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold53436: 1685-2184 Arabidopsis halleri
Araha.53436s0001 1.0kb upstream 1.0kb upstream 5192 true Scaffold53436: 2185-7376 Arabidopsis halleri
Araha.53436s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold53436: 6377-7376 Arabidopsis halleri
Araha.53436s0001 1.0kb downstream 1.0kb downstream 5192 true Scaffold53436: 1185-6376 Arabidopsis halleri
Araha.53436s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold53436: 1185-2184 Arabidopsis halleri
Araha.53436s0001 2.0kb upstream 2.0kb upstream 5348 true Scaffold53436: 2185-7532 Arabidopsis halleri
Araha.53436s0001 2.0kb upstream 2.0kb upstream 1156 false Scaffold53436: 6377-7532 Arabidopsis halleri
Araha.53436s0001 2.0kb downstream 2.0kb downstream 6192 true Scaffold53436: 185-6376 Arabidopsis halleri
Araha.53436s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold53436: 185-2184 Arabidopsis halleri
Araha.53436s0001 5.0kb upstream 5.0kb upstream 5348 true Scaffold53436: 2185-7532 Arabidopsis halleri
Araha.53436s0001 5.0kb upstream 5.0kb upstream 1156 false Scaffold53436: 6377-7532 Arabidopsis halleri
Araha.53436s0001 5.0kb downstream 5.0kb downstream 6376 true Scaffold53436: 1-6376 Arabidopsis halleri
Araha.53436s0001 5.0kb downstream 5.0kb downstream 2184 false Scaffold53436: 1-2184 Arabidopsis halleri
Araha.53436s0001 10.0kb upstream 10.0kb upstream 5348 true Scaffold53436: 2185-7532 Arabidopsis halleri
Araha.53436s0001 10.0kb upstream 10.0kb upstream 1156 false Scaffold53436: 6377-7532 Arabidopsis halleri
Araha.53436s0001 10.0kb downstream 10.0kb downstream 6376 true Scaffold53436: 1-6376 Arabidopsis halleri
Araha.53436s0001 10.0kb downstream 10.0kb downstream 2184 false Scaffold53436: 1-2184 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368019 5261 Brassicaceae View MSA
123836752 5264 Brassicales-Malvales View MSA
124343464 5266 SBM View MSA
124238939 5268 Malvidae View MSA
124061441 5270 Rosid View MSA
123746948 5271 Pentapetalae View MSA
122794503 5272 Eudicot View MSA
122045455 5273 Angiosperm View MSA
121310450 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain