Gene : Araha.58172s0006 A. halleri v1.1
Defline:  (1 of 1) PTHR11670:SF38 - 3-ISOPROPYLMALATE DEHYDRATASE Genomic Order:  6
Name:  ? Araha.58172s0006 Secondary Identifier:  ? PAC:28856717
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri BRANCHED-CHAIN-AA-SYN-PWY Arabidopsis halleri pathologic  
Ahalleri LEUSYN-PWY Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.58172s0006 0.5kb upstream 0.5kb upstream 1891 true Scaffold58172: 5198-7088 Arabidopsis halleri
Araha.58172s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold58172: 5198-5697 Arabidopsis halleri
Araha.58172s0006 0.5kb downstream 0.5kb downstream 1891 true Scaffold58172: 5698-7588 Arabidopsis halleri
Araha.58172s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold58172: 7089-7588 Arabidopsis halleri
Araha.58172s0006 1.0kb upstream 1.0kb upstream 2391 true Scaffold58172: 4698-7088 Arabidopsis halleri
Araha.58172s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold58172: 4698-5697 Arabidopsis halleri
Araha.58172s0006 1.0kb downstream 1.0kb downstream 2141 true Scaffold58172: 5698-7838 Arabidopsis halleri
Araha.58172s0006 1.0kb downstream 1.0kb downstream 750 false Scaffold58172: 7089-7838 Arabidopsis halleri
Araha.58172s0006 2.0kb upstream 2.0kb upstream 3391 true Scaffold58172: 3698-7088 Arabidopsis halleri
Araha.58172s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold58172: 3698-5697 Arabidopsis halleri
Araha.58172s0006 2.0kb downstream 2.0kb downstream 2141 true Scaffold58172: 5698-7838 Arabidopsis halleri
Araha.58172s0006 2.0kb downstream 2.0kb downstream 750 false Scaffold58172: 7089-7838 Arabidopsis halleri
Araha.58172s0006 5.0kb upstream 5.0kb upstream 6391 true Scaffold58172: 698-7088 Arabidopsis halleri
Araha.58172s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold58172: 698-5697 Arabidopsis halleri
Araha.58172s0006 5.0kb downstream 5.0kb downstream 2141 true Scaffold58172: 5698-7838 Arabidopsis halleri
Araha.58172s0006 5.0kb downstream 5.0kb downstream 750 false Scaffold58172: 7089-7838 Arabidopsis halleri
Araha.58172s0006 10.0kb upstream 10.0kb upstream 7088 true Scaffold58172: 1-7088 Arabidopsis halleri
Araha.58172s0006 10.0kb upstream 10.0kb upstream 5697 false Scaffold58172: 1-5697 Arabidopsis halleri
Araha.58172s0006 10.0kb downstream 10.0kb downstream 2141 true Scaffold58172: 5698-7838 Arabidopsis halleri
Araha.58172s0006 10.0kb downstream 10.0kb downstream 750 false Scaffold58172: 7089-7838 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121487122 5273 Angiosperm Singleton cluster - no MSA
122320853 5261 Brassicaceae Singleton cluster - no MSA
123762448 5264 Brassicales-Malvales Singleton cluster - no MSA
124261083 5266 SBM Singleton cluster - no MSA
124117702 5268 Malvidae Singleton cluster - no MSA
123847093 5270 Rosid Singleton cluster - no MSA
123433373 5271 Pentapetalae Singleton cluster - no MSA
122468993 5272 Eudicot Singleton cluster - no MSA
120760511 5274 Embryophyte Singleton cluster - no MSA
122802954 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain