Gene : Cagra.0447s0009 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11945:SF194 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL3-RELATED Genomic Order:  9
Name:  ? Cagra.0447s0009 Secondary Identifier:  ? PAC:28914498
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0447s0009 0.5kb upstream 0.5kb upstream 3174 true Scaffold447: 29243-32416 Capsella grandiflora
Cagra.0447s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold447: 31917-32416 Capsella grandiflora
Cagra.0447s0009 0.5kb downstream 0.5kb downstream 3174 true Scaffold447: 28743-31916 Capsella grandiflora
Cagra.0447s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold447: 28743-29242 Capsella grandiflora
Cagra.0447s0009 1.0kb upstream 1.0kb upstream 3674 true Scaffold447: 29243-32916 Capsella grandiflora
Cagra.0447s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold447: 31917-32916 Capsella grandiflora
Cagra.0447s0009 1.0kb downstream 1.0kb downstream 3674 true Scaffold447: 28243-31916 Capsella grandiflora
Cagra.0447s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold447: 28243-29242 Capsella grandiflora
Cagra.0447s0009 2.0kb upstream 2.0kb upstream 4674 true Scaffold447: 29243-33916 Capsella grandiflora
Cagra.0447s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold447: 31917-33916 Capsella grandiflora
Cagra.0447s0009 2.0kb downstream 2.0kb downstream 4674 true Scaffold447: 27243-31916 Capsella grandiflora
Cagra.0447s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold447: 27243-29242 Capsella grandiflora
Cagra.0447s0009 5.0kb upstream 5.0kb upstream 7674 true Scaffold447: 29243-36916 Capsella grandiflora
Cagra.0447s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold447: 31917-36916 Capsella grandiflora
Cagra.0447s0009 5.0kb downstream 5.0kb downstream 7674 true Scaffold447: 24243-31916 Capsella grandiflora
Cagra.0447s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold447: 24243-29242 Capsella grandiflora
Cagra.0447s0009 10.0kb upstream 10.0kb upstream 12674 true Scaffold447: 29243-41916 Capsella grandiflora
Cagra.0447s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold447: 31917-41916 Capsella grandiflora
Cagra.0447s0009 10.0kb downstream 10.0kb downstream 12674 true Scaffold447: 19243-31916 Capsella grandiflora
Cagra.0447s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold447: 19243-29242 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379062 5261 Brassicaceae View MSA
123837553 5264 Brassicales-Malvales View MSA
124322334 5266 SBM View MSA
124247992 5268 Malvidae View MSA
124073384 5270 Rosid View MSA
123750627 5271 Pentapetalae View MSA
122793492 5272 Eudicot View MSA
122049609 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain