Gene : Cagra.0056s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24006:SF493 - UBIQUITIN CARBOXYL-TERMINAL HYDROLASE Genomic Order:  1
Name:  ? Cagra.0056s0001 Secondary Identifier:  ? PAC:28903252
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0056s0001 0.5kb upstream 0.5kb upstream 2943 true Scaffold56: 1659-4601 Capsella grandiflora
Cagra.0056s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold56: 1659-2158 Capsella grandiflora
Cagra.0056s0001 0.5kb downstream 0.5kb downstream 2943 true Scaffold56: 2159-5101 Capsella grandiflora
Cagra.0056s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold56: 4602-5101 Capsella grandiflora
Cagra.0056s0001 1.0kb upstream 1.0kb upstream 3443 true Scaffold56: 1159-4601 Capsella grandiflora
Cagra.0056s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold56: 1159-2158 Capsella grandiflora
Cagra.0056s0001 1.0kb downstream 1.0kb downstream 3443 true Scaffold56: 2159-5601 Capsella grandiflora
Cagra.0056s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold56: 4602-5601 Capsella grandiflora
Cagra.0056s0001 2.0kb upstream 2.0kb upstream 4443 true Scaffold56: 159-4601 Capsella grandiflora
Cagra.0056s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold56: 159-2158 Capsella grandiflora
Cagra.0056s0001 2.0kb downstream 2.0kb downstream 4443 true Scaffold56: 2159-6601 Capsella grandiflora
Cagra.0056s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold56: 4602-6601 Capsella grandiflora
Cagra.0056s0001 5.0kb upstream 5.0kb upstream 4601 true Scaffold56: 1-4601 Capsella grandiflora
Cagra.0056s0001 5.0kb upstream 5.0kb upstream 2158 false Scaffold56: 1-2158 Capsella grandiflora
Cagra.0056s0001 5.0kb downstream 5.0kb downstream 7443 true Scaffold56: 2159-9601 Capsella grandiflora
Cagra.0056s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold56: 4602-9601 Capsella grandiflora
Cagra.0056s0001 10.0kb upstream 10.0kb upstream 4601 true Scaffold56: 1-4601 Capsella grandiflora
Cagra.0056s0001 10.0kb upstream 10.0kb upstream 2158 false Scaffold56: 1-2158 Capsella grandiflora
Cagra.0056s0001 10.0kb downstream 10.0kb downstream 12443 true Scaffold56: 2159-14601 Capsella grandiflora
Cagra.0056s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold56: 4602-14601 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370957 5261 Brassicaceae View MSA
123841128 5264 Brassicales-Malvales View MSA
124347322 5266 SBM View MSA
124252112 5268 Malvidae View MSA
124062278 5270 Rosid View MSA
123750100 5271 Pentapetalae View MSA
122785636 5272 Eudicot View MSA
122044065 5273 Angiosperm View MSA
123428966 5275 Viridiplantae View MSA
121345111 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain