Gene : Cagra.0062s0024 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31071:SF9 - INTRACELLULAR PROTEIN TRANSPORT PROTEIN USO1-LIKE PROTEIN Genomic Order:  24
Name:  ? Cagra.0062s0024 Secondary Identifier:  ? PAC:28893957
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0062s0024 0.5kb upstream 0.5kb upstream 3614 true Scaffold62: 67135-70748 Capsella grandiflora
Cagra.0062s0024 0.5kb upstream 0.5kb upstream 500 false Scaffold62: 70249-70748 Capsella grandiflora
Cagra.0062s0024 0.5kb downstream 0.5kb downstream 3614 true Scaffold62: 66635-70248 Capsella grandiflora
Cagra.0062s0024 0.5kb downstream 0.5kb downstream 500 false Scaffold62: 66635-67134 Capsella grandiflora
Cagra.0062s0024 1.0kb upstream 1.0kb upstream 4114 true Scaffold62: 67135-71248 Capsella grandiflora
Cagra.0062s0024 1.0kb upstream 1.0kb upstream 1000 false Scaffold62: 70249-71248 Capsella grandiflora
Cagra.0062s0024 1.0kb downstream 1.0kb downstream 4114 true Scaffold62: 66135-70248 Capsella grandiflora
Cagra.0062s0024 1.0kb downstream 1.0kb downstream 1000 false Scaffold62: 66135-67134 Capsella grandiflora
Cagra.0062s0024 2.0kb upstream 2.0kb upstream 5114 true Scaffold62: 67135-72248 Capsella grandiflora
Cagra.0062s0024 2.0kb upstream 2.0kb upstream 2000 false Scaffold62: 70249-72248 Capsella grandiflora
Cagra.0062s0024 2.0kb downstream 2.0kb downstream 5114 true Scaffold62: 65135-70248 Capsella grandiflora
Cagra.0062s0024 2.0kb downstream 2.0kb downstream 2000 false Scaffold62: 65135-67134 Capsella grandiflora
Cagra.0062s0024 5.0kb upstream 5.0kb upstream 8114 true Scaffold62: 67135-75248 Capsella grandiflora
Cagra.0062s0024 5.0kb upstream 5.0kb upstream 5000 false Scaffold62: 70249-75248 Capsella grandiflora
Cagra.0062s0024 5.0kb downstream 5.0kb downstream 8114 true Scaffold62: 62135-70248 Capsella grandiflora
Cagra.0062s0024 5.0kb downstream 5.0kb downstream 5000 false Scaffold62: 62135-67134 Capsella grandiflora
Cagra.0062s0024 10.0kb upstream 10.0kb upstream 13114 true Scaffold62: 67135-80248 Capsella grandiflora
Cagra.0062s0024 10.0kb upstream 10.0kb upstream 10000 false Scaffold62: 70249-80248 Capsella grandiflora
Cagra.0062s0024 10.0kb downstream 10.0kb downstream 13114 true Scaffold62: 57135-70248 Capsella grandiflora
Cagra.0062s0024 10.0kb downstream 10.0kb downstream 10000 false Scaffold62: 57135-67134 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372440 5261 Brassicaceae View MSA
123800363 5264 Brassicales-Malvales View MSA
124297780 5266 SBM View MSA
124149582 5268 Malvidae View MSA
124072871 5270 Rosid View MSA
123736575 5271 Pentapetalae View MSA
122797498 5272 Eudicot View MSA
122044970 5273 Angiosperm View MSA
121310375 5274 Embryophyte View MSA
123347876 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain