Gene : Cagra.0050s0046 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31384:SF17 - AUXIN RESPONSE FACTOR 11-RELATED Genomic Order:  46
Name:  ? Cagra.0050s0046 Secondary Identifier:  ? PAC:28916987
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0050s0046 0.5kb upstream 0.5kb upstream 4363 true Scaffold50: 195547-199909 Capsella grandiflora
Cagra.0050s0046 0.5kb upstream 0.5kb upstream 500 false Scaffold50: 199410-199909 Capsella grandiflora
Cagra.0050s0046 0.5kb downstream 0.5kb downstream 4363 true Scaffold50: 195047-199409 Capsella grandiflora
Cagra.0050s0046 0.5kb downstream 0.5kb downstream 500 false Scaffold50: 195047-195546 Capsella grandiflora
Cagra.0050s0046 1.0kb upstream 1.0kb upstream 4863 true Scaffold50: 195547-200409 Capsella grandiflora
Cagra.0050s0046 1.0kb upstream 1.0kb upstream 1000 false Scaffold50: 199410-200409 Capsella grandiflora
Cagra.0050s0046 1.0kb downstream 1.0kb downstream 4863 true Scaffold50: 194547-199409 Capsella grandiflora
Cagra.0050s0046 1.0kb downstream 1.0kb downstream 1000 false Scaffold50: 194547-195546 Capsella grandiflora
Cagra.0050s0046 2.0kb upstream 2.0kb upstream 5863 true Scaffold50: 195547-201409 Capsella grandiflora
Cagra.0050s0046 2.0kb upstream 2.0kb upstream 2000 false Scaffold50: 199410-201409 Capsella grandiflora
Cagra.0050s0046 2.0kb downstream 2.0kb downstream 5863 true Scaffold50: 193547-199409 Capsella grandiflora
Cagra.0050s0046 2.0kb downstream 2.0kb downstream 2000 false Scaffold50: 193547-195546 Capsella grandiflora
Cagra.0050s0046 5.0kb upstream 5.0kb upstream 8863 true Scaffold50: 195547-204409 Capsella grandiflora
Cagra.0050s0046 5.0kb upstream 5.0kb upstream 5000 false Scaffold50: 199410-204409 Capsella grandiflora
Cagra.0050s0046 5.0kb downstream 5.0kb downstream 8863 true Scaffold50: 190547-199409 Capsella grandiflora
Cagra.0050s0046 5.0kb downstream 5.0kb downstream 5000 false Scaffold50: 190547-195546 Capsella grandiflora
Cagra.0050s0046 10.0kb upstream 10.0kb upstream 13863 true Scaffold50: 195547-209409 Capsella grandiflora
Cagra.0050s0046 10.0kb upstream 10.0kb upstream 10000 false Scaffold50: 199410-209409 Capsella grandiflora
Cagra.0050s0046 10.0kb downstream 10.0kb downstream 13863 true Scaffold50: 185547-199409 Capsella grandiflora
Cagra.0050s0046 10.0kb downstream 10.0kb downstream 10000 false Scaffold50: 185547-195546 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360587 5261 Brassicaceae View MSA
123840958 5264 Brassicales-Malvales View MSA
124344703 5266 SBM View MSA
124250631 5268 Malvidae View MSA
124070371 5270 Rosid View MSA
123743990 5271 Pentapetalae View MSA
122792006 5272 Eudicot View MSA
122050868 5273 Angiosperm View MSA
121348224 5274 Embryophyte View MSA
123380779 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain