Gene : Cagra.0050s0055 C. grandiflora v1.1
Defline:  (1 of 5) PTHR10217:SF465 - CYCLIC NUCLEOTIDE-GATED ION CHANNEL 11-RELATED Genomic Order:  55
Name:  ? Cagra.0050s0055 Secondary Identifier:  ? PAC:28916980
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0050s0055 0.5kb upstream 0.5kb upstream 3161 true Scaffold50: 234770-237930 Capsella grandiflora
Cagra.0050s0055 0.5kb upstream 0.5kb upstream 500 false Scaffold50: 237431-237930 Capsella grandiflora
Cagra.0050s0055 0.5kb downstream 0.5kb downstream 3161 true Scaffold50: 234270-237430 Capsella grandiflora
Cagra.0050s0055 0.5kb downstream 0.5kb downstream 500 false Scaffold50: 234270-234769 Capsella grandiflora
Cagra.0050s0055 1.0kb upstream 1.0kb upstream 3661 true Scaffold50: 234770-238430 Capsella grandiflora
Cagra.0050s0055 1.0kb upstream 1.0kb upstream 1000 false Scaffold50: 237431-238430 Capsella grandiflora
Cagra.0050s0055 1.0kb downstream 1.0kb downstream 3661 true Scaffold50: 233770-237430 Capsella grandiflora
Cagra.0050s0055 1.0kb downstream 1.0kb downstream 1000 false Scaffold50: 233770-234769 Capsella grandiflora
Cagra.0050s0055 2.0kb upstream 2.0kb upstream 4661 true Scaffold50: 234770-239430 Capsella grandiflora
Cagra.0050s0055 2.0kb upstream 2.0kb upstream 2000 false Scaffold50: 237431-239430 Capsella grandiflora
Cagra.0050s0055 2.0kb downstream 2.0kb downstream 4661 true Scaffold50: 232770-237430 Capsella grandiflora
Cagra.0050s0055 2.0kb downstream 2.0kb downstream 2000 false Scaffold50: 232770-234769 Capsella grandiflora
Cagra.0050s0055 5.0kb upstream 5.0kb upstream 7661 true Scaffold50: 234770-242430 Capsella grandiflora
Cagra.0050s0055 5.0kb upstream 5.0kb upstream 5000 false Scaffold50: 237431-242430 Capsella grandiflora
Cagra.0050s0055 5.0kb downstream 5.0kb downstream 7661 true Scaffold50: 229770-237430 Capsella grandiflora
Cagra.0050s0055 5.0kb downstream 5.0kb downstream 5000 false Scaffold50: 229770-234769 Capsella grandiflora
Cagra.0050s0055 10.0kb upstream 10.0kb upstream 12661 true Scaffold50: 234770-247430 Capsella grandiflora
Cagra.0050s0055 10.0kb upstream 10.0kb upstream 10000 false Scaffold50: 237431-247430 Capsella grandiflora
Cagra.0050s0055 10.0kb downstream 10.0kb downstream 12661 true Scaffold50: 224770-237430 Capsella grandiflora
Cagra.0050s0055 10.0kb downstream 10.0kb downstream 10000 false Scaffold50: 224770-234769 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510204 5273 Angiosperm View MSA
122360543 5261 Brassicaceae View MSA
123797972 5264 Brassicales-Malvales View MSA
124295665 5266 SBM View MSA
124148041 5268 Malvidae View MSA
123874124 5270 Rosid View MSA
123458143 5271 Pentapetalae View MSA
122493554 5272 Eudicot View MSA
120783314 5274 Embryophyte View MSA
122825338 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain