Gene : Cagra.0050s0083 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10994:SF89 - RETICULON-LIKE PROTEIN B5-RELATED Genomic Order:  83
Name:  ? Cagra.0050s0083 Secondary Identifier:  ? PAC:28917012
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0050s0083 0.5kb upstream 0.5kb upstream 2230 true Scaffold50: 342689-344918 Capsella grandiflora
Cagra.0050s0083 0.5kb upstream 0.5kb upstream 500 false Scaffold50: 344419-344918 Capsella grandiflora
Cagra.0050s0083 0.5kb downstream 0.5kb downstream 2230 true Scaffold50: 342189-344418 Capsella grandiflora
Cagra.0050s0083 0.5kb downstream 0.5kb downstream 500 false Scaffold50: 342189-342688 Capsella grandiflora
Cagra.0050s0083 1.0kb upstream 1.0kb upstream 2730 true Scaffold50: 342689-345418 Capsella grandiflora
Cagra.0050s0083 1.0kb upstream 1.0kb upstream 1000 false Scaffold50: 344419-345418 Capsella grandiflora
Cagra.0050s0083 1.0kb downstream 1.0kb downstream 2730 true Scaffold50: 341689-344418 Capsella grandiflora
Cagra.0050s0083 1.0kb downstream 1.0kb downstream 1000 false Scaffold50: 341689-342688 Capsella grandiflora
Cagra.0050s0083 2.0kb upstream 2.0kb upstream 3730 true Scaffold50: 342689-346418 Capsella grandiflora
Cagra.0050s0083 2.0kb upstream 2.0kb upstream 2000 false Scaffold50: 344419-346418 Capsella grandiflora
Cagra.0050s0083 2.0kb downstream 2.0kb downstream 3730 true Scaffold50: 340689-344418 Capsella grandiflora
Cagra.0050s0083 2.0kb downstream 2.0kb downstream 2000 false Scaffold50: 340689-342688 Capsella grandiflora
Cagra.0050s0083 5.0kb upstream 5.0kb upstream 6730 true Scaffold50: 342689-349418 Capsella grandiflora
Cagra.0050s0083 5.0kb upstream 5.0kb upstream 5000 false Scaffold50: 344419-349418 Capsella grandiflora
Cagra.0050s0083 5.0kb downstream 5.0kb downstream 6730 true Scaffold50: 337689-344418 Capsella grandiflora
Cagra.0050s0083 5.0kb downstream 5.0kb downstream 5000 false Scaffold50: 337689-342688 Capsella grandiflora
Cagra.0050s0083 10.0kb upstream 10.0kb upstream 11730 true Scaffold50: 342689-354418 Capsella grandiflora
Cagra.0050s0083 10.0kb upstream 10.0kb upstream 10000 false Scaffold50: 344419-354418 Capsella grandiflora
Cagra.0050s0083 10.0kb downstream 10.0kb downstream 11730 true Scaffold50: 332689-344418 Capsella grandiflora
Cagra.0050s0083 10.0kb downstream 10.0kb downstream 10000 false Scaffold50: 332689-342688 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372708 5261 Brassicaceae View MSA
123827491 5264 Brassicales-Malvales View MSA
124343239 5266 SBM View MSA
124252411 5268 Malvidae View MSA
124069227 5270 Rosid View MSA
123749221 5271 Pentapetalae View MSA
122790829 5272 Eudicot View MSA
122049511 5273 Angiosperm View MSA
123429002 5275 Viridiplantae View MSA
121351639 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain