Gene : Cagra.0050s0102 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11165:SF62 - SKP1-LIKE PROTEIN 20-RELATED Genomic Order:  102
Name:  ? Cagra.0050s0102 Secondary Identifier:  ? PAC:28917102
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0050s0102 0.5kb upstream 0.5kb upstream 2785 true Scaffold50: 403553-406337 Capsella grandiflora
Cagra.0050s0102 0.5kb upstream 0.5kb upstream 500 false Scaffold50: 403553-404052 Capsella grandiflora
Cagra.0050s0102 0.5kb downstream 0.5kb downstream 2785 true Scaffold50: 404053-406837 Capsella grandiflora
Cagra.0050s0102 0.5kb downstream 0.5kb downstream 500 false Scaffold50: 406338-406837 Capsella grandiflora
Cagra.0050s0102 1.0kb upstream 1.0kb upstream 3285 true Scaffold50: 403053-406337 Capsella grandiflora
Cagra.0050s0102 1.0kb upstream 1.0kb upstream 1000 false Scaffold50: 403053-404052 Capsella grandiflora
Cagra.0050s0102 1.0kb downstream 1.0kb downstream 3285 true Scaffold50: 404053-407337 Capsella grandiflora
Cagra.0050s0102 1.0kb downstream 1.0kb downstream 1000 false Scaffold50: 406338-407337 Capsella grandiflora
Cagra.0050s0102 2.0kb upstream 2.0kb upstream 4285 true Scaffold50: 402053-406337 Capsella grandiflora
Cagra.0050s0102 2.0kb upstream 2.0kb upstream 2000 false Scaffold50: 402053-404052 Capsella grandiflora
Cagra.0050s0102 2.0kb downstream 2.0kb downstream 4285 true Scaffold50: 404053-408337 Capsella grandiflora
Cagra.0050s0102 2.0kb downstream 2.0kb downstream 2000 false Scaffold50: 406338-408337 Capsella grandiflora
Cagra.0050s0102 5.0kb upstream 5.0kb upstream 7285 true Scaffold50: 399053-406337 Capsella grandiflora
Cagra.0050s0102 5.0kb upstream 5.0kb upstream 5000 false Scaffold50: 399053-404052 Capsella grandiflora
Cagra.0050s0102 5.0kb downstream 5.0kb downstream 7285 true Scaffold50: 404053-411337 Capsella grandiflora
Cagra.0050s0102 5.0kb downstream 5.0kb downstream 5000 false Scaffold50: 406338-411337 Capsella grandiflora
Cagra.0050s0102 10.0kb upstream 10.0kb upstream 12285 true Scaffold50: 394053-406337 Capsella grandiflora
Cagra.0050s0102 10.0kb upstream 10.0kb upstream 10000 false Scaffold50: 394053-404052 Capsella grandiflora
Cagra.0050s0102 10.0kb downstream 10.0kb downstream 12285 true Scaffold50: 404053-416337 Capsella grandiflora
Cagra.0050s0102 10.0kb downstream 10.0kb downstream 10000 false Scaffold50: 406338-416337 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041112 5273 Angiosperm View MSA
122361301 5261 Brassicaceae View MSA
123798133 5264 Brassicales-Malvales View MSA
124295808 5266 SBM View MSA
124247968 5268 Malvidae View MSA
124072135 5270 Rosid View MSA
123751098 5271 Pentapetalae View MSA
122789409 5272 Eudicot View MSA
121347198 5274 Embryophyte View MSA
123426227 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain