Gene : Cagra.0050s0099 C. grandiflora v1.1
Defline:  (1 of 2) PTHR34797:SF1 - EXPRESSED PROTEIN Genomic Order:  99
Name:  ? Cagra.0050s0099 Secondary Identifier:  ? PAC:28916976
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0050s0099 0.5kb upstream 0.5kb upstream 2399 true Scaffold50: 391271-393669 Capsella grandiflora
Cagra.0050s0099 0.5kb upstream 0.5kb upstream 500 false Scaffold50: 391271-391770 Capsella grandiflora
Cagra.0050s0099 0.5kb downstream 0.5kb downstream 2399 true Scaffold50: 391771-394169 Capsella grandiflora
Cagra.0050s0099 0.5kb downstream 0.5kb downstream 500 false Scaffold50: 393670-394169 Capsella grandiflora
Cagra.0050s0099 1.0kb upstream 1.0kb upstream 2899 true Scaffold50: 390771-393669 Capsella grandiflora
Cagra.0050s0099 1.0kb upstream 1.0kb upstream 1000 false Scaffold50: 390771-391770 Capsella grandiflora
Cagra.0050s0099 1.0kb downstream 1.0kb downstream 2899 true Scaffold50: 391771-394669 Capsella grandiflora
Cagra.0050s0099 1.0kb downstream 1.0kb downstream 1000 false Scaffold50: 393670-394669 Capsella grandiflora
Cagra.0050s0099 2.0kb upstream 2.0kb upstream 3899 true Scaffold50: 389771-393669 Capsella grandiflora
Cagra.0050s0099 2.0kb upstream 2.0kb upstream 2000 false Scaffold50: 389771-391770 Capsella grandiflora
Cagra.0050s0099 2.0kb downstream 2.0kb downstream 3899 true Scaffold50: 391771-395669 Capsella grandiflora
Cagra.0050s0099 2.0kb downstream 2.0kb downstream 2000 false Scaffold50: 393670-395669 Capsella grandiflora
Cagra.0050s0099 5.0kb upstream 5.0kb upstream 6899 true Scaffold50: 386771-393669 Capsella grandiflora
Cagra.0050s0099 5.0kb upstream 5.0kb upstream 5000 false Scaffold50: 386771-391770 Capsella grandiflora
Cagra.0050s0099 5.0kb downstream 5.0kb downstream 6899 true Scaffold50: 391771-398669 Capsella grandiflora
Cagra.0050s0099 5.0kb downstream 5.0kb downstream 5000 false Scaffold50: 393670-398669 Capsella grandiflora
Cagra.0050s0099 10.0kb upstream 10.0kb upstream 11899 true Scaffold50: 381771-393669 Capsella grandiflora
Cagra.0050s0099 10.0kb upstream 10.0kb upstream 10000 false Scaffold50: 381771-391770 Capsella grandiflora
Cagra.0050s0099 10.0kb downstream 10.0kb downstream 11899 true Scaffold50: 391771-403669 Capsella grandiflora
Cagra.0050s0099 10.0kb downstream 10.0kb downstream 10000 false Scaffold50: 393670-403669 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041192 5273 Angiosperm View MSA
122363774 5261 Brassicaceae View MSA
123837297 5264 Brassicales-Malvales View MSA
124341426 5266 SBM View MSA
124251662 5268 Malvidae View MSA
124069169 5270 Rosid View MSA
123746892 5271 Pentapetalae View MSA
122786328 5272 Eudicot View MSA
121349557 5274 Embryophyte View MSA
123381356 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain