Gene : Cagra.0084s0068 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11514:SF58 - TRANSCRIPTION FACTOR SPEECHLESS Genomic Order:  68
Name:  ? Cagra.0084s0068 Secondary Identifier:  ? PAC:28895317
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0084s0068 0.5kb upstream 0.5kb upstream 2613 true Scaffold84: 275815-278427 Capsella grandiflora
Cagra.0084s0068 0.5kb upstream 0.5kb upstream 500 false Scaffold84: 277928-278427 Capsella grandiflora
Cagra.0084s0068 0.5kb downstream 0.5kb downstream 2613 true Scaffold84: 275315-277927 Capsella grandiflora
Cagra.0084s0068 0.5kb downstream 0.5kb downstream 500 false Scaffold84: 275315-275814 Capsella grandiflora
Cagra.0084s0068 1.0kb upstream 1.0kb upstream 3113 true Scaffold84: 275815-278927 Capsella grandiflora
Cagra.0084s0068 1.0kb upstream 1.0kb upstream 1000 false Scaffold84: 277928-278927 Capsella grandiflora
Cagra.0084s0068 1.0kb downstream 1.0kb downstream 3113 true Scaffold84: 274815-277927 Capsella grandiflora
Cagra.0084s0068 1.0kb downstream 1.0kb downstream 1000 false Scaffold84: 274815-275814 Capsella grandiflora
Cagra.0084s0068 2.0kb upstream 2.0kb upstream 4113 true Scaffold84: 275815-279927 Capsella grandiflora
Cagra.0084s0068 2.0kb upstream 2.0kb upstream 2000 false Scaffold84: 277928-279927 Capsella grandiflora
Cagra.0084s0068 2.0kb downstream 2.0kb downstream 4113 true Scaffold84: 273815-277927 Capsella grandiflora
Cagra.0084s0068 2.0kb downstream 2.0kb downstream 2000 false Scaffold84: 273815-275814 Capsella grandiflora
Cagra.0084s0068 5.0kb upstream 5.0kb upstream 7113 true Scaffold84: 275815-282927 Capsella grandiflora
Cagra.0084s0068 5.0kb upstream 5.0kb upstream 5000 false Scaffold84: 277928-282927 Capsella grandiflora
Cagra.0084s0068 5.0kb downstream 5.0kb downstream 7113 true Scaffold84: 270815-277927 Capsella grandiflora
Cagra.0084s0068 5.0kb downstream 5.0kb downstream 5000 false Scaffold84: 270815-275814 Capsella grandiflora
Cagra.0084s0068 10.0kb upstream 10.0kb upstream 12113 true Scaffold84: 275815-287927 Capsella grandiflora
Cagra.0084s0068 10.0kb upstream 10.0kb upstream 10000 false Scaffold84: 277928-287927 Capsella grandiflora
Cagra.0084s0068 10.0kb downstream 10.0kb downstream 12113 true Scaffold84: 265815-277927 Capsella grandiflora
Cagra.0084s0068 10.0kb downstream 10.0kb downstream 10000 false Scaffold84: 265815-275814 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368479 5261 Brassicaceae View MSA
123840058 5264 Brassicales-Malvales View MSA
124343509 5266 SBM View MSA
124253997 5268 Malvidae View MSA
124060972 5270 Rosid View MSA
123746034 5271 Pentapetalae View MSA
122787503 5272 Eudicot View MSA
122042444 5273 Angiosperm View MSA
121350598 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain