Gene : Cagra.0084s0089 C. grandiflora v1.1
Defline:  (1 of 1) 1.4.1.14 - Glutamate synthase (NADH) / NADH-glutamate synthase Genomic Order:  89
Name:  ? Cagra.0084s0089 Secondary Identifier:  ? PAC:28895346
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora GLUGLNSYN-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-3282 Capsella grandiflora pathologic  
Cgrandiflora PWY-6963 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0084s0089 0.5kb upstream 0.5kb upstream 9811 true Scaffold84: 384133-393943 Capsella grandiflora
Cagra.0084s0089 0.5kb upstream 0.5kb upstream 500 false Scaffold84: 384133-384632 Capsella grandiflora
Cagra.0084s0089 0.5kb downstream 0.5kb downstream 9811 true Scaffold84: 384633-394443 Capsella grandiflora
Cagra.0084s0089 0.5kb downstream 0.5kb downstream 500 false Scaffold84: 393944-394443 Capsella grandiflora
Cagra.0084s0089 1.0kb upstream 1.0kb upstream 10311 true Scaffold84: 383633-393943 Capsella grandiflora
Cagra.0084s0089 1.0kb upstream 1.0kb upstream 1000 false Scaffold84: 383633-384632 Capsella grandiflora
Cagra.0084s0089 1.0kb downstream 1.0kb downstream 10311 true Scaffold84: 384633-394943 Capsella grandiflora
Cagra.0084s0089 1.0kb downstream 1.0kb downstream 1000 false Scaffold84: 393944-394943 Capsella grandiflora
Cagra.0084s0089 2.0kb upstream 2.0kb upstream 11311 true Scaffold84: 382633-393943 Capsella grandiflora
Cagra.0084s0089 2.0kb upstream 2.0kb upstream 2000 false Scaffold84: 382633-384632 Capsella grandiflora
Cagra.0084s0089 2.0kb downstream 2.0kb downstream 11311 true Scaffold84: 384633-395943 Capsella grandiflora
Cagra.0084s0089 2.0kb downstream 2.0kb downstream 2000 false Scaffold84: 393944-395943 Capsella grandiflora
Cagra.0084s0089 5.0kb upstream 5.0kb upstream 14311 true Scaffold84: 379633-393943 Capsella grandiflora
Cagra.0084s0089 5.0kb upstream 5.0kb upstream 5000 false Scaffold84: 379633-384632 Capsella grandiflora
Cagra.0084s0089 5.0kb downstream 5.0kb downstream 14311 true Scaffold84: 384633-398943 Capsella grandiflora
Cagra.0084s0089 5.0kb downstream 5.0kb downstream 5000 false Scaffold84: 393944-398943 Capsella grandiflora
Cagra.0084s0089 10.0kb upstream 10.0kb upstream 19311 true Scaffold84: 374633-393943 Capsella grandiflora
Cagra.0084s0089 10.0kb upstream 10.0kb upstream 10000 false Scaffold84: 374633-384632 Capsella grandiflora
Cagra.0084s0089 10.0kb downstream 10.0kb downstream 19311 true Scaffold84: 384633-403943 Capsella grandiflora
Cagra.0084s0089 10.0kb downstream 10.0kb downstream 10000 false Scaffold84: 393944-403943 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366728 5261 Brassicaceae View MSA
123832225 5264 Brassicales-Malvales View MSA
124341222 5266 SBM View MSA
124241008 5268 Malvidae View MSA
124067049 5270 Rosid View MSA
123737951 5271 Pentapetalae View MSA
122793648 5272 Eudicot View MSA
122047244 5273 Angiosperm View MSA
121349673 5274 Embryophyte View MSA
123426109 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain