Gene : Cagra.0084s0093 C. grandiflora v1.1
Defline:  (1 of 2) PTHR14221:SF1 - TRANSDUCIN/WD40 DOMAIN-CONTAINING PROTEIN Genomic Order:  93
Name:  ? Cagra.0084s0093 Secondary Identifier:  ? PAC:28895326
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0084s0093 0.5kb upstream 0.5kb upstream 4224 true Scaffold84: 410799-415022 Capsella grandiflora
Cagra.0084s0093 0.5kb upstream 0.5kb upstream 500 false Scaffold84: 414523-415022 Capsella grandiflora
Cagra.0084s0093 0.5kb downstream 0.5kb downstream 4224 true Scaffold84: 410299-414522 Capsella grandiflora
Cagra.0084s0093 0.5kb downstream 0.5kb downstream 500 false Scaffold84: 410299-410798 Capsella grandiflora
Cagra.0084s0093 1.0kb upstream 1.0kb upstream 4724 true Scaffold84: 410799-415522 Capsella grandiflora
Cagra.0084s0093 1.0kb upstream 1.0kb upstream 1000 false Scaffold84: 414523-415522 Capsella grandiflora
Cagra.0084s0093 1.0kb downstream 1.0kb downstream 4724 true Scaffold84: 409799-414522 Capsella grandiflora
Cagra.0084s0093 1.0kb downstream 1.0kb downstream 1000 false Scaffold84: 409799-410798 Capsella grandiflora
Cagra.0084s0093 2.0kb upstream 2.0kb upstream 5335 true Scaffold84: 410799-416133 Capsella grandiflora
Cagra.0084s0093 2.0kb upstream 2.0kb upstream 1611 false Scaffold84: 414523-416133 Capsella grandiflora
Cagra.0084s0093 2.0kb downstream 2.0kb downstream 5724 true Scaffold84: 408799-414522 Capsella grandiflora
Cagra.0084s0093 2.0kb downstream 2.0kb downstream 2000 false Scaffold84: 408799-410798 Capsella grandiflora
Cagra.0084s0093 5.0kb upstream 5.0kb upstream 5335 true Scaffold84: 410799-416133 Capsella grandiflora
Cagra.0084s0093 5.0kb upstream 5.0kb upstream 1611 false Scaffold84: 414523-416133 Capsella grandiflora
Cagra.0084s0093 5.0kb downstream 5.0kb downstream 8724 true Scaffold84: 405799-414522 Capsella grandiflora
Cagra.0084s0093 5.0kb downstream 5.0kb downstream 5000 false Scaffold84: 405799-410798 Capsella grandiflora
Cagra.0084s0093 10.0kb upstream 10.0kb upstream 5335 true Scaffold84: 410799-416133 Capsella grandiflora
Cagra.0084s0093 10.0kb upstream 10.0kb upstream 1611 false Scaffold84: 414523-416133 Capsella grandiflora
Cagra.0084s0093 10.0kb downstream 10.0kb downstream 13724 true Scaffold84: 400799-414522 Capsella grandiflora
Cagra.0084s0093 10.0kb downstream 10.0kb downstream 10000 false Scaffold84: 400799-410798 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372887 5261 Brassicaceae View MSA
123841367 5264 Brassicales-Malvales View MSA
124340152 5266 SBM View MSA
124252451 5268 Malvidae View MSA
124060751 5270 Rosid View MSA
123745945 5271 Pentapetalae View MSA
122797236 5272 Eudicot View MSA
122045221 5273 Angiosperm View MSA
123429146 5275 Viridiplantae View MSA
121350952 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain