Gene : Cagra.0043s0017 C. grandiflora v1.1
Defline:  (1 of 2) PTHR19876//PTHR19876:SF7 - COATOMER Genomic Order:  17
Name:  ? Cagra.0043s0017 Secondary Identifier:  ? PAC:28899255
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0043s0017 0.5kb upstream 0.5kb upstream 5082 true Scaffold43: 75516-80597 Capsella grandiflora
Cagra.0043s0017 0.5kb upstream 0.5kb upstream 500 false Scaffold43: 75516-76015 Capsella grandiflora
Cagra.0043s0017 0.5kb downstream 0.5kb downstream 5082 true Scaffold43: 76016-81097 Capsella grandiflora
Cagra.0043s0017 0.5kb downstream 0.5kb downstream 500 false Scaffold43: 80598-81097 Capsella grandiflora
Cagra.0043s0017 1.0kb upstream 1.0kb upstream 5582 true Scaffold43: 75016-80597 Capsella grandiflora
Cagra.0043s0017 1.0kb upstream 1.0kb upstream 1000 false Scaffold43: 75016-76015 Capsella grandiflora
Cagra.0043s0017 1.0kb downstream 1.0kb downstream 5582 true Scaffold43: 76016-81597 Capsella grandiflora
Cagra.0043s0017 1.0kb downstream 1.0kb downstream 1000 false Scaffold43: 80598-81597 Capsella grandiflora
Cagra.0043s0017 2.0kb upstream 2.0kb upstream 6582 true Scaffold43: 74016-80597 Capsella grandiflora
Cagra.0043s0017 2.0kb upstream 2.0kb upstream 2000 false Scaffold43: 74016-76015 Capsella grandiflora
Cagra.0043s0017 2.0kb downstream 2.0kb downstream 6582 true Scaffold43: 76016-82597 Capsella grandiflora
Cagra.0043s0017 2.0kb downstream 2.0kb downstream 2000 false Scaffold43: 80598-82597 Capsella grandiflora
Cagra.0043s0017 5.0kb upstream 5.0kb upstream 9582 true Scaffold43: 71016-80597 Capsella grandiflora
Cagra.0043s0017 5.0kb upstream 5.0kb upstream 5000 false Scaffold43: 71016-76015 Capsella grandiflora
Cagra.0043s0017 5.0kb downstream 5.0kb downstream 9582 true Scaffold43: 76016-85597 Capsella grandiflora
Cagra.0043s0017 5.0kb downstream 5.0kb downstream 5000 false Scaffold43: 80598-85597 Capsella grandiflora
Cagra.0043s0017 10.0kb upstream 10.0kb upstream 14582 true Scaffold43: 66016-80597 Capsella grandiflora
Cagra.0043s0017 10.0kb upstream 10.0kb upstream 10000 false Scaffold43: 66016-76015 Capsella grandiflora
Cagra.0043s0017 10.0kb downstream 10.0kb downstream 14582 true Scaffold43: 76016-90597 Capsella grandiflora
Cagra.0043s0017 10.0kb downstream 10.0kb downstream 10000 false Scaffold43: 80598-90597 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378022 5261 Brassicaceae View MSA
123841029 5264 Brassicales-Malvales View MSA
124337320 5266 SBM View MSA
124243842 5268 Malvidae View MSA
124068022 5270 Rosid View MSA
123750852 5271 Pentapetalae View MSA
122787725 5272 Eudicot View MSA
122046406 5273 Angiosperm View MSA
121345159 5274 Embryophyte View MSA
123428224 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain