Protein Family : Coatomer, alpha subunit 124337320

Method ID:  5266 Method Name:  SBM
Sequence Alignment:  View MSA Member Count:  21

21 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
orange1.1g000933m.g (1 of 1) PTHR19876//PTHR19876:SF7 - COATOMER C. sinensis v1.1 5707   scaffold00237: 227050-232756
AT1G62020 (1 of 2) K05236 - coatomer protein complex, subunit alpha (xenin) (COPA) A. thaliana TAIR10 4491   Chr1: 22919534-22924024
AT2G21390 (1 of 2) K05236 - coatomer protein complex, subunit alpha (xenin) (COPA) A. thaliana TAIR10 4873   Chr2: 9152006-9156878
Thhalv10024240m.g (1 of 3) PTHR19876//PTHR19876:SF7 - COATOMER E. salsugineum v1.0 4793   scaffold_1: 340928-345720
Thhalv10000016m.g (1 of 3) PTHR19876//PTHR19876:SF7 - COATOMER E. salsugineum v1.0 5180   scaffold_15: 170590-175769
Ciclev10027697m.g (1 of 1) PTHR19876//PTHR19876:SF7 - COATOMER C. clementina v1.0 5776   scaffold_8: 6193646-6199421
Gorai.008G031400 (1 of 5) PTHR19876//PTHR19876:SF7 - COATOMER G. raimondii v2.1 5572   Chr08: 3766557-3772128
Gorai.005G247300 (1 of 5) PTHR19876//PTHR19876:SF7 - COATOMER G. raimondii v2.1 6006   Chr05: 62726237-62732242
Gorai.005G247200 (1 of 5) PTHR19876//PTHR19876:SF7 - COATOMER G. raimondii v2.1 11017   Chr05: 62712717-62723733
Thecc1EG006812 (1 of 3) K05236 - coatomer protein complex, subunit alpha (xenin) (COPA) T. cacao v1.1 6208   scaffold_2: 3901720-3907927
Thecc1EG006813 (1 of 3) K05236 - coatomer protein complex, subunit alpha (xenin) (COPA) T. cacao v1.1 6577   scaffold_2: 3908063-3914639
Cagra.0043s0017 (1 of 2) PTHR19876//PTHR19876:SF7 - COATOMER C. grandiflora v1.1 4582   Scaffold43: 76016-80597
Cagra.2961s0041 (1 of 2) PTHR19876//PTHR19876:SF7 - COATOMER C. grandiflora v1.1 4873   Scaffold2961: 125419-130291
Brara.H01794 (1 of 5) PTHR19876//PTHR19876:SF7 - COATOMER B. rapa FPsc v1.3 4889   A08: 17193169-17198057
Brara.A00052 (1 of 5) PTHR19876//PTHR19876:SF7 - COATOMER B. rapa FPsc v1.3 4750   A01: 304182-308931
Bostr.5022s0097 (1 of 2) PF00400//PF04053//PF06957 - WD domain, G-beta repeat (WD40) // Coatomer WD associated region (Coatomer_WDAD) // Coatomer (COPI) alpha subunit C-terminus (COPI_C) B. stricta v1.2 4905   Scaffold5022: 731030-735934
Bostr.22157s0156 (1 of 2) PF00400//PF04053//PF06957 - WD domain, G-beta repeat (WD40) // Coatomer WD associated region (Coatomer_WDAD) // Coatomer (COPI) alpha subunit C-terminus (COPI_C) B. stricta v1.2 4669   Scaffold22157: 1112420-1117088
AL2G13910 (1 of 3) K05236 - coatomer protein complex, subunit alpha (xenin) (COPA) A. lyrata v2.1 4220   scaffold_2: 1963333-1967552
AL4G10580 (1 of 3) K05236 - coatomer protein complex, subunit alpha (xenin) (COPA) A. lyrata v2.1 4568   scaffold_4: 293162-297729
Carub.0004s0044 (1 of 2) K05236 - coatomer protein complex, subunit alpha (xenin) (COPA) C. rubella v1.1 5160   scaffold_4: 145308-150467
Carub.0002s0301 (1 of 2) K05236 - coatomer protein complex, subunit alpha (xenin) (COPA) C. rubella v1.1 4566   scaffold_2: 1264265-1268830

21 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Thhalv10024240m E. salsugineum v1.0 124337320 Coatomer, alpha subunit 2 5266 SBM
Thhalv10000016m E. salsugineum v1.0 124337320 Coatomer, alpha subunit 2 5266 SBM
Gorai.005G247300.1 G. raimondii v2.1 124337320 Coatomer, alpha subunit 3 5266 SBM
Gorai.008G031400.1 G. raimondii v2.1 124337320 Coatomer, alpha subunit 3 5266 SBM
Cagra.0043s0017.1.p C. grandiflora v1.1 124337320 Coatomer, alpha subunit 2 5266 SBM
Brara.H01794.1.p B. rapa FPsc v1.3 124337320 Coatomer, alpha subunit 2 5266 SBM
Bostr.22157s0156.1.p B. stricta v1.2 124337320 Coatomer, alpha subunit 2 5266 SBM
orange1.1g000933m C. sinensis v1.1 124337320 Coatomer, alpha subunit 1 5266 SBM
AT1G62020.1 A. thaliana TAIR10 124337320 Coatomer, alpha subunit 2 5266 SBM
AT2G21390.1 A. thaliana TAIR10 124337320 Coatomer, alpha subunit 2 5266 SBM
Ciclev10027697m C. clementina v1.0 124337320 Coatomer, alpha subunit 1 5266 SBM
Gorai.005G247200.1 G. raimondii v2.1 124337320 Coatomer, alpha subunit 3 5266 SBM
Thecc1EG006812t1 T. cacao v1.1 124337320 Coatomer, alpha subunit 2 5266 SBM
Thecc1EG006813t1 T. cacao v1.1 124337320 Coatomer, alpha subunit 2 5266 SBM
Cagra.2961s0041.1.p C. grandiflora v1.1 124337320 Coatomer, alpha subunit 2 5266 SBM
Brara.A00052.1.p B. rapa FPsc v1.3 124337320 Coatomer, alpha subunit 2 5266 SBM
Bostr.5022s0097.1.p B. stricta v1.2 124337320 Coatomer, alpha subunit 2 5266 SBM
AL4G10580.t1 A. lyrata v2.1 124337320 Coatomer, alpha subunit 2 5266 SBM
AL2G13910.t1 A. lyrata v2.1 124337320 Coatomer, alpha subunit 2 5266 SBM
Carub.0002s0301.1.p C. rubella v1.1 124337320 Coatomer, alpha subunit 2 5266 SBM
Carub.0004s0044.1.p C. rubella v1.1 124337320 Coatomer, alpha subunit 2 5266 SBM