Gene : Carub.0002s0301 C. rubella v1.1
Defline:  (1 of 2) K05236 - coatomer protein complex, subunit alpha (xenin) (COPA) Genomic Order:  301
Name:  ? Carub.0002s0301 Secondary Identifier:  ? PAC:39245437
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s0301 0.5kb upstream 0.5kb upstream 5066 true scaffold_2: 1264265-1269330 Capsella rubella
Carub.0002s0301 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 1268831-1269330 Capsella rubella
Carub.0002s0301 0.5kb downstream 0.5kb downstream 5066 true scaffold_2: 1263765-1268830 Capsella rubella
Carub.0002s0301 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 1263765-1264264 Capsella rubella
Carub.0002s0301 1.0kb upstream 1.0kb upstream 5566 true scaffold_2: 1264265-1269830 Capsella rubella
Carub.0002s0301 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 1268831-1269830 Capsella rubella
Carub.0002s0301 1.0kb downstream 1.0kb downstream 5566 true scaffold_2: 1263265-1268830 Capsella rubella
Carub.0002s0301 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 1263265-1264264 Capsella rubella
Carub.0002s0301 2.0kb upstream 2.0kb upstream 6566 true scaffold_2: 1264265-1270830 Capsella rubella
Carub.0002s0301 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 1268831-1270830 Capsella rubella
Carub.0002s0301 2.0kb downstream 2.0kb downstream 6566 true scaffold_2: 1262265-1268830 Capsella rubella
Carub.0002s0301 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 1262265-1264264 Capsella rubella
Carub.0002s0301 5.0kb upstream 5.0kb upstream 9566 true scaffold_2: 1264265-1273830 Capsella rubella
Carub.0002s0301 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 1268831-1273830 Capsella rubella
Carub.0002s0301 5.0kb downstream 5.0kb downstream 9566 true scaffold_2: 1259265-1268830 Capsella rubella
Carub.0002s0301 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 1259265-1264264 Capsella rubella
Carub.0002s0301 10.0kb upstream 10.0kb upstream 14566 true scaffold_2: 1264265-1278830 Capsella rubella
Carub.0002s0301 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 1268831-1278830 Capsella rubella
Carub.0002s0301 10.0kb downstream 10.0kb downstream 14566 true scaffold_2: 1254265-1268830 Capsella rubella
Carub.0002s0301 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 1254265-1264264 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378022 5261 Brassicaceae View MSA
123841029 5264 Brassicales-Malvales View MSA
124337320 5266 SBM View MSA
124243842 5268 Malvidae View MSA
124068022 5270 Rosid View MSA
123750852 5271 Pentapetalae View MSA
122787725 5272 Eudicot View MSA
122046406 5273 Angiosperm View MSA
121345159 5274 Embryophyte View MSA
123428224 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain