Gene : AL4G10580 A. lyrata v2.1
Defline:  (1 of 3) K05236 - coatomer protein complex, subunit alpha (xenin) (COPA) Genomic Order:  52
Name:  ? AL4G10580 Secondary Identifier:  ? PAC:35922156
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G10580 0.5kb upstream 0.5kb upstream 5068   true scaffold_4: 292662-297729 Arabidopsis lyrata
AL4G10580 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 292662-293161 Arabidopsis lyrata
AL4G10580 0.5kb downstream 0.5kb downstream 5068   true scaffold_4: 293162-298229 Arabidopsis lyrata
AL4G10580 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 297730-298229 Arabidopsis lyrata
AL4G10580 1.0kb upstream 1.0kb upstream 5568   true scaffold_4: 292162-297729 Arabidopsis lyrata
AL4G10580 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 292162-293161 Arabidopsis lyrata
AL4G10580 1.0kb downstream 1.0kb downstream 5568   true scaffold_4: 293162-298729 Arabidopsis lyrata
AL4G10580 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 297730-298729 Arabidopsis lyrata
AL4G10580 2.0kb upstream 2.0kb upstream 6568   true scaffold_4: 291162-297729 Arabidopsis lyrata
AL4G10580 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 291162-293161 Arabidopsis lyrata
AL4G10580 2.0kb downstream 2.0kb downstream 6568   true scaffold_4: 293162-299729 Arabidopsis lyrata
AL4G10580 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 297730-299729 Arabidopsis lyrata
AL4G10580 5.0kb upstream 5.0kb upstream 9568   true scaffold_4: 288162-297729 Arabidopsis lyrata
AL4G10580 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 288162-293161 Arabidopsis lyrata
AL4G10580 5.0kb downstream 5.0kb downstream 9568   true scaffold_4: 293162-302729 Arabidopsis lyrata
AL4G10580 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 297730-302729 Arabidopsis lyrata
AL4G10580 10.0kb upstream 10.0kb upstream 14568   true scaffold_4: 283162-297729 Arabidopsis lyrata
AL4G10580 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 283162-293161 Arabidopsis lyrata
AL4G10580 10.0kb downstream 10.0kb downstream 14568   true scaffold_4: 293162-307729 Arabidopsis lyrata
AL4G10580 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 297730-307729 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378022 5261 Brassicaceae View MSA
123841029 5264 Brassicales-Malvales View MSA
124337320 5266 SBM View MSA
124243842 5268 Malvidae View MSA
124068022 5270 Rosid View MSA
123750852 5271 Pentapetalae View MSA
122787725 5272 Eudicot View MSA
122046406 5273 Angiosperm View MSA
121345159 5274 Embryophyte View MSA
123428224 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain