Gene : Thecc1EG006812 T. cacao v1.1
Defline:  (1 of 3) K05236 - coatomer protein complex, subunit alpha (xenin) (COPA) Genomic Order:  743
Name:  ? Thecc1EG006812 Secondary Identifier:  ? PAC:27464745
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006812 0.5kb upstream 0.5kb upstream 6708 true scaffold_2: 3901220-3907927 Theobroma cacao
Thecc1EG006812 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 3901220-3901719 Theobroma cacao
Thecc1EG006812 0.5kb downstream 0.5kb downstream 6708 true scaffold_2: 3901720-3908427 Theobroma cacao
Thecc1EG006812 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 3907928-3908427 Theobroma cacao
Thecc1EG006812 1.0kb upstream 1.0kb upstream 7208 true scaffold_2: 3900720-3907927 Theobroma cacao
Thecc1EG006812 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 3900720-3901719 Theobroma cacao
Thecc1EG006812 1.0kb downstream 1.0kb downstream 7208 true scaffold_2: 3901720-3908927 Theobroma cacao
Thecc1EG006812 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 3907928-3908927 Theobroma cacao
Thecc1EG006812 2.0kb upstream 2.0kb upstream 8208 true scaffold_2: 3899720-3907927 Theobroma cacao
Thecc1EG006812 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 3899720-3901719 Theobroma cacao
Thecc1EG006812 2.0kb downstream 2.0kb downstream 8208 true scaffold_2: 3901720-3909927 Theobroma cacao
Thecc1EG006812 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 3907928-3909927 Theobroma cacao
Thecc1EG006812 5.0kb upstream 5.0kb upstream 11208 true scaffold_2: 3896720-3907927 Theobroma cacao
Thecc1EG006812 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 3896720-3901719 Theobroma cacao
Thecc1EG006812 5.0kb downstream 5.0kb downstream 11208 true scaffold_2: 3901720-3912927 Theobroma cacao
Thecc1EG006812 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 3907928-3912927 Theobroma cacao
Thecc1EG006812 10.0kb upstream 10.0kb upstream 16208 true scaffold_2: 3891720-3907927 Theobroma cacao
Thecc1EG006812 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 3891720-3901719 Theobroma cacao
Thecc1EG006812 10.0kb downstream 10.0kb downstream 16208 true scaffold_2: 3901720-3917927 Theobroma cacao
Thecc1EG006812 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 3907928-3917927 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841029 5264 Brassicales-Malvales View MSA
124337320 5266 SBM View MSA
124243842 5268 Malvidae View MSA
124068022 5270 Rosid View MSA
123750852 5271 Pentapetalae View MSA
122787725 5272 Eudicot View MSA
122046406 5273 Angiosperm View MSA
121345159 5274 Embryophyte View MSA
123428224 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain