Gene : Cagra.0027s0006 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24055:SF196 - MITOGEN-ACTIVATED PROTEIN KINASE 14-RELATED Genomic Order:  6
Name:  ? Cagra.0027s0006 Secondary Identifier:  ? PAC:28895751
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0027s0006 0.5kb upstream 0.5kb upstream 2529 true Scaffold27: 12674-15202 Capsella grandiflora
Cagra.0027s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold27: 12674-13173 Capsella grandiflora
Cagra.0027s0006 0.5kb downstream 0.5kb downstream 2529 true Scaffold27: 13174-15702 Capsella grandiflora
Cagra.0027s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold27: 15203-15702 Capsella grandiflora
Cagra.0027s0006 1.0kb upstream 1.0kb upstream 3029 true Scaffold27: 12174-15202 Capsella grandiflora
Cagra.0027s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold27: 12174-13173 Capsella grandiflora
Cagra.0027s0006 1.0kb downstream 1.0kb downstream 3029 true Scaffold27: 13174-16202 Capsella grandiflora
Cagra.0027s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold27: 15203-16202 Capsella grandiflora
Cagra.0027s0006 2.0kb upstream 2.0kb upstream 4029 true Scaffold27: 11174-15202 Capsella grandiflora
Cagra.0027s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold27: 11174-13173 Capsella grandiflora
Cagra.0027s0006 2.0kb downstream 2.0kb downstream 4029 true Scaffold27: 13174-17202 Capsella grandiflora
Cagra.0027s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold27: 15203-17202 Capsella grandiflora
Cagra.0027s0006 5.0kb upstream 5.0kb upstream 7029 true Scaffold27: 8174-15202 Capsella grandiflora
Cagra.0027s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold27: 8174-13173 Capsella grandiflora
Cagra.0027s0006 5.0kb downstream 5.0kb downstream 7029 true Scaffold27: 13174-20202 Capsella grandiflora
Cagra.0027s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold27: 15203-20202 Capsella grandiflora
Cagra.0027s0006 10.0kb upstream 10.0kb upstream 12029 true Scaffold27: 3174-15202 Capsella grandiflora
Cagra.0027s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold27: 3174-13173 Capsella grandiflora
Cagra.0027s0006 10.0kb downstream 10.0kb downstream 12029 true Scaffold27: 13174-25202 Capsella grandiflora
Cagra.0027s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold27: 15203-25202 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378545 5261 Brassicaceae View MSA
123838325 5264 Brassicales-Malvales View MSA
124340761 5266 SBM View MSA
124244718 5268 Malvidae View MSA
124070284 5270 Rosid View MSA
123752459 5271 Pentapetalae View MSA
122793937 5272 Eudicot View MSA
122041657 5273 Angiosperm View MSA
121346969 5274 Embryophyte View MSA
123428294 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain