Gene : Cagra.0084s0012 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11528:SF53 - HEAT SHOCK PROTEIN 90-1 Genomic Order:  12
Name:  ? Cagra.0084s0012 Secondary Identifier:  ? PAC:28895353
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0084s0012 0.5kb upstream 0.5kb upstream 3409 true Scaffold84: 30040-33448 Capsella grandiflora
Cagra.0084s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold84: 30040-30539 Capsella grandiflora
Cagra.0084s0012 0.5kb downstream 0.5kb downstream 3409 true Scaffold84: 30540-33948 Capsella grandiflora
Cagra.0084s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold84: 33449-33948 Capsella grandiflora
Cagra.0084s0012 1.0kb upstream 1.0kb upstream 3909 true Scaffold84: 29540-33448 Capsella grandiflora
Cagra.0084s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold84: 29540-30539 Capsella grandiflora
Cagra.0084s0012 1.0kb downstream 1.0kb downstream 3909 true Scaffold84: 30540-34448 Capsella grandiflora
Cagra.0084s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold84: 33449-34448 Capsella grandiflora
Cagra.0084s0012 2.0kb upstream 2.0kb upstream 4909 true Scaffold84: 28540-33448 Capsella grandiflora
Cagra.0084s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold84: 28540-30539 Capsella grandiflora
Cagra.0084s0012 2.0kb downstream 2.0kb downstream 4909 true Scaffold84: 30540-35448 Capsella grandiflora
Cagra.0084s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold84: 33449-35448 Capsella grandiflora
Cagra.0084s0012 5.0kb upstream 5.0kb upstream 7909 true Scaffold84: 25540-33448 Capsella grandiflora
Cagra.0084s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold84: 25540-30539 Capsella grandiflora
Cagra.0084s0012 5.0kb downstream 5.0kb downstream 7909 true Scaffold84: 30540-38448 Capsella grandiflora
Cagra.0084s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold84: 33449-38448 Capsella grandiflora
Cagra.0084s0012 10.0kb upstream 10.0kb upstream 12909 true Scaffold84: 20540-33448 Capsella grandiflora
Cagra.0084s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold84: 20540-30539 Capsella grandiflora
Cagra.0084s0012 10.0kb downstream 10.0kb downstream 12909 true Scaffold84: 30540-43448 Capsella grandiflora
Cagra.0084s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold84: 33449-43448 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379880 5261 Brassicaceae View MSA
123836712 5264 Brassicales-Malvales View MSA
124341843 5266 SBM View MSA
124252909 5268 Malvidae View MSA
124072569 5270 Rosid View MSA
123746935 5271 Pentapetalae View MSA
122790601 5272 Eudicot View MSA
122044273 5273 Angiosperm View MSA
121351601 5274 Embryophyte View MSA
123424999 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain