Gene : Cagra.0084s0020 C. grandiflora v1.1
Defline:  (1 of 69) PTHR22814 - COPPER TRANSPORT PROTEIN ATOX1-RELATED Genomic Order:  20
Name:  ? Cagra.0084s0020 Secondary Identifier:  ? PAC:28895310
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0084s0020 0.5kb upstream 0.5kb upstream 1626 true Scaffold84: 64977-66602 Capsella grandiflora
Cagra.0084s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold84: 64977-65476 Capsella grandiflora
Cagra.0084s0020 0.5kb downstream 0.5kb downstream 1626 true Scaffold84: 65477-67102 Capsella grandiflora
Cagra.0084s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold84: 66603-67102 Capsella grandiflora
Cagra.0084s0020 1.0kb upstream 1.0kb upstream 2126 true Scaffold84: 64477-66602 Capsella grandiflora
Cagra.0084s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold84: 64477-65476 Capsella grandiflora
Cagra.0084s0020 1.0kb downstream 1.0kb downstream 2126 true Scaffold84: 65477-67602 Capsella grandiflora
Cagra.0084s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold84: 66603-67602 Capsella grandiflora
Cagra.0084s0020 2.0kb upstream 2.0kb upstream 3126 true Scaffold84: 63477-66602 Capsella grandiflora
Cagra.0084s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold84: 63477-65476 Capsella grandiflora
Cagra.0084s0020 2.0kb downstream 2.0kb downstream 3126 true Scaffold84: 65477-68602 Capsella grandiflora
Cagra.0084s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold84: 66603-68602 Capsella grandiflora
Cagra.0084s0020 5.0kb upstream 5.0kb upstream 6126 true Scaffold84: 60477-66602 Capsella grandiflora
Cagra.0084s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold84: 60477-65476 Capsella grandiflora
Cagra.0084s0020 5.0kb downstream 5.0kb downstream 6126 true Scaffold84: 65477-71602 Capsella grandiflora
Cagra.0084s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold84: 66603-71602 Capsella grandiflora
Cagra.0084s0020 10.0kb upstream 10.0kb upstream 11126 true Scaffold84: 55477-66602 Capsella grandiflora
Cagra.0084s0020 10.0kb upstream 10.0kb upstream 10000 false Scaffold84: 55477-65476 Capsella grandiflora
Cagra.0084s0020 10.0kb downstream 10.0kb downstream 11126 true Scaffold84: 65477-76602 Capsella grandiflora
Cagra.0084s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold84: 66603-76602 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122334391 5261 Brassicaceae Singleton cluster - no MSA
123838445 5264 Brassicales-Malvales View MSA
124349979 5266 SBM View MSA
124250678 5268 Malvidae View MSA
124072200 5270 Rosid View MSA
123751300 5271 Pentapetalae View MSA
122793053 5272 Eudicot View MSA
122051560 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain