Gene : Cagra.0007s0005 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10774:SF80 - CALCIUM-DEPENDENT LIPID-BINDING DOMAIN-CONTAINING PROTEIN Genomic Order:  5
Name:  ? Cagra.0007s0005 Secondary Identifier:  ? PAC:28903162
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0007s0005 0.5kb upstream 0.5kb upstream 4181 true Scaffold7: 23509-27689 Capsella grandiflora
Cagra.0007s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold7: 27190-27689 Capsella grandiflora
Cagra.0007s0005 0.5kb downstream 0.5kb downstream 4181 true Scaffold7: 23009-27189 Capsella grandiflora
Cagra.0007s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold7: 23009-23508 Capsella grandiflora
Cagra.0007s0005 1.0kb upstream 1.0kb upstream 4681 true Scaffold7: 23509-28189 Capsella grandiflora
Cagra.0007s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold7: 27190-28189 Capsella grandiflora
Cagra.0007s0005 1.0kb downstream 1.0kb downstream 4681 true Scaffold7: 22509-27189 Capsella grandiflora
Cagra.0007s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold7: 22509-23508 Capsella grandiflora
Cagra.0007s0005 2.0kb upstream 2.0kb upstream 5681 true Scaffold7: 23509-29189 Capsella grandiflora
Cagra.0007s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold7: 27190-29189 Capsella grandiflora
Cagra.0007s0005 2.0kb downstream 2.0kb downstream 5681 true Scaffold7: 21509-27189 Capsella grandiflora
Cagra.0007s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold7: 21509-23508 Capsella grandiflora
Cagra.0007s0005 5.0kb upstream 5.0kb upstream 8681 true Scaffold7: 23509-32189 Capsella grandiflora
Cagra.0007s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold7: 27190-32189 Capsella grandiflora
Cagra.0007s0005 5.0kb downstream 5.0kb downstream 8681 true Scaffold7: 18509-27189 Capsella grandiflora
Cagra.0007s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold7: 18509-23508 Capsella grandiflora
Cagra.0007s0005 10.0kb upstream 10.0kb upstream 13681 true Scaffold7: 23509-37189 Capsella grandiflora
Cagra.0007s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold7: 27190-37189 Capsella grandiflora
Cagra.0007s0005 10.0kb downstream 10.0kb downstream 13681 true Scaffold7: 13509-27189 Capsella grandiflora
Cagra.0007s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold7: 13509-23508 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366907 5261 Brassicaceae View MSA
123829504 5264 Brassicales-Malvales View MSA
124339384 5266 SBM View MSA
124247865 5268 Malvidae View MSA
124066710 5270 Rosid View MSA
123745986 5271 Pentapetalae View MSA
122787732 5272 Eudicot View MSA
122045584 5273 Angiosperm View MSA
121350253 5274 Embryophyte View MSA
123426647 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain