Gene : Cagra.0007s0045 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31072:SF3 - TRANSCRIPTION FACTOR TCP10-RELATED Genomic Order:  45
Name:  ? Cagra.0007s0045 Secondary Identifier:  ? PAC:28903118
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0007s0045 0.5kb upstream 0.5kb upstream 2630 true Scaffold7: 163657-166286 Capsella grandiflora
Cagra.0007s0045 0.5kb upstream 0.5kb upstream 500 false Scaffold7: 163657-164156 Capsella grandiflora
Cagra.0007s0045 0.5kb downstream 0.5kb downstream 2630 true Scaffold7: 164157-166786 Capsella grandiflora
Cagra.0007s0045 0.5kb downstream 0.5kb downstream 500 false Scaffold7: 166287-166786 Capsella grandiflora
Cagra.0007s0045 1.0kb upstream 1.0kb upstream 3130 true Scaffold7: 163157-166286 Capsella grandiflora
Cagra.0007s0045 1.0kb upstream 1.0kb upstream 1000 false Scaffold7: 163157-164156 Capsella grandiflora
Cagra.0007s0045 1.0kb downstream 1.0kb downstream 3130 true Scaffold7: 164157-167286 Capsella grandiflora
Cagra.0007s0045 1.0kb downstream 1.0kb downstream 1000 false Scaffold7: 166287-167286 Capsella grandiflora
Cagra.0007s0045 2.0kb upstream 2.0kb upstream 4130 true Scaffold7: 162157-166286 Capsella grandiflora
Cagra.0007s0045 2.0kb upstream 2.0kb upstream 2000 false Scaffold7: 162157-164156 Capsella grandiflora
Cagra.0007s0045 2.0kb downstream 2.0kb downstream 4130 true Scaffold7: 164157-168286 Capsella grandiflora
Cagra.0007s0045 2.0kb downstream 2.0kb downstream 2000 false Scaffold7: 166287-168286 Capsella grandiflora
Cagra.0007s0045 5.0kb upstream 5.0kb upstream 7130 true Scaffold7: 159157-166286 Capsella grandiflora
Cagra.0007s0045 5.0kb upstream 5.0kb upstream 5000 false Scaffold7: 159157-164156 Capsella grandiflora
Cagra.0007s0045 5.0kb downstream 5.0kb downstream 7130 true Scaffold7: 164157-171286 Capsella grandiflora
Cagra.0007s0045 5.0kb downstream 5.0kb downstream 5000 false Scaffold7: 166287-171286 Capsella grandiflora
Cagra.0007s0045 10.0kb upstream 10.0kb upstream 12130 true Scaffold7: 154157-166286 Capsella grandiflora
Cagra.0007s0045 10.0kb upstream 10.0kb upstream 10000 false Scaffold7: 154157-164156 Capsella grandiflora
Cagra.0007s0045 10.0kb downstream 10.0kb downstream 12130 true Scaffold7: 164157-176286 Capsella grandiflora
Cagra.0007s0045 10.0kb downstream 10.0kb downstream 10000 false Scaffold7: 166287-176286 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370495 5261 Brassicaceae View MSA
123840957 5264 Brassicales-Malvales View MSA
124348245 5266 SBM View MSA
124247355 5268 Malvidae View MSA
124070231 5270 Rosid View MSA
123742325 5271 Pentapetalae View MSA
122789743 5272 Eudicot View MSA
122046366 5273 Angiosperm View MSA
121350950 5274 Embryophyte View MSA
123381946 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain