Gene : Cagra.0448s0036 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12131//PTHR12131:SF4 - ATP-DEPENDENT RNA AND DNA HELICASE Genomic Order:  36
Name:  ? Cagra.0448s0036 Secondary Identifier:  ? PAC:28906342
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0448s0036 0.5kb upstream 0.5kb upstream 7741 true Scaffold448: 123446-131186 Capsella grandiflora
Cagra.0448s0036 0.5kb upstream 0.5kb upstream 500 false Scaffold448: 130687-131186 Capsella grandiflora
Cagra.0448s0036 0.5kb downstream 0.5kb downstream 7741 true Scaffold448: 122946-130686 Capsella grandiflora
Cagra.0448s0036 0.5kb downstream 0.5kb downstream 500 false Scaffold448: 122946-123445 Capsella grandiflora
Cagra.0448s0036 1.0kb upstream 1.0kb upstream 8241 true Scaffold448: 123446-131686 Capsella grandiflora
Cagra.0448s0036 1.0kb upstream 1.0kb upstream 1000 false Scaffold448: 130687-131686 Capsella grandiflora
Cagra.0448s0036 1.0kb downstream 1.0kb downstream 8241 true Scaffold448: 122446-130686 Capsella grandiflora
Cagra.0448s0036 1.0kb downstream 1.0kb downstream 1000 false Scaffold448: 122446-123445 Capsella grandiflora
Cagra.0448s0036 2.0kb upstream 2.0kb upstream 9241 true Scaffold448: 123446-132686 Capsella grandiflora
Cagra.0448s0036 2.0kb upstream 2.0kb upstream 2000 false Scaffold448: 130687-132686 Capsella grandiflora
Cagra.0448s0036 2.0kb downstream 2.0kb downstream 9241 true Scaffold448: 121446-130686 Capsella grandiflora
Cagra.0448s0036 2.0kb downstream 2.0kb downstream 2000 false Scaffold448: 121446-123445 Capsella grandiflora
Cagra.0448s0036 5.0kb upstream 5.0kb upstream 12241 true Scaffold448: 123446-135686 Capsella grandiflora
Cagra.0448s0036 5.0kb upstream 5.0kb upstream 5000 false Scaffold448: 130687-135686 Capsella grandiflora
Cagra.0448s0036 5.0kb downstream 5.0kb downstream 12241 true Scaffold448: 118446-130686 Capsella grandiflora
Cagra.0448s0036 5.0kb downstream 5.0kb downstream 5000 false Scaffold448: 118446-123445 Capsella grandiflora
Cagra.0448s0036 10.0kb upstream 10.0kb upstream 17241 true Scaffold448: 123446-140686 Capsella grandiflora
Cagra.0448s0036 10.0kb upstream 10.0kb upstream 10000 false Scaffold448: 130687-140686 Capsella grandiflora
Cagra.0448s0036 10.0kb downstream 10.0kb downstream 17241 true Scaffold448: 113446-130686 Capsella grandiflora
Cagra.0448s0036 10.0kb downstream 10.0kb downstream 10000 false Scaffold448: 113446-123445 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361239 5261 Brassicaceae View MSA
123833402 5264 Brassicales-Malvales View MSA
124337825 5266 SBM View MSA
124238521 5268 Malvidae View MSA
124064775 5270 Rosid View MSA
123739917 5271 Pentapetalae View MSA
122788898 5272 Eudicot View MSA
122042140 5273 Angiosperm View MSA
121344115 5274 Embryophyte View MSA
123424218 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain