Protein Family : RNA helicase, ATP-dependent, SK12/DOB1 protein 123424218

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  68

68 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
403447 (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) S. moellendorffii v1.0 5217   scaffold_1: 2576126-2581342
29751.t000015 (1 of 1) K12599 - antiviral helicase SKI2 (SKI2, SKIV2L) R. communis v0.1 16805   29751: 70479-87283
Cucsa.146840 (1 of 1) PTHR12131//PTHR12131:SF4 - ATP-DEPENDENT RNA AND DNA HELICASE C. sativus v1.0 24971   scaffold01100: 189111-214081
orange1.1g039491m.g (1 of 1) PTHR12131//PTHR12131:SF4 - ATP-DEPENDENT RNA AND DNA HELICASE C. sinensis v1.1 12739   scaffold00026: 365187-377925
AT3G46960 (1 of 1) K12599 - antiviral helicase SKI2 (SKI2, SKIV2L) A. thaliana TAIR10 7195   Chr3: 17290873-17298067
Thhalv10010069m.g (1 of 1) PTHR12131//PTHR12131:SF4 - ATP-DEPENDENT RNA AND DNA HELICASE E. salsugineum v1.0 7332   scaffold_16: 4813852-4821183
Ciclev10027687m.g (1 of 1) PTHR12131//PTHR12131:SF4 - ATP-DEPENDENT RNA AND DNA HELICASE C. clementina v1.0 12914   scaffold_8: 24170233-24183146
Lus10017528.g (1 of 1) PTHR12131//PTHR12131:SF4 - ATP-DEPENDENT RNA AND DNA HELICASE L. usitatissimum v1.0 8275   scaffold1253: 443719-451993
Gorai.003G125100 (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) G. raimondii v2.1 12401   Chr03: 37290357-37302757
e_gw1.18.9.1 (1 of 3) PF08148 - DSHCT (NUC185) domain (DSHCT) C. subellipsoidea C-169 v2.0 9747   scaffold_18: 670351-680097
gm1.3465_g (1 of 1) PF00270//PF08148//PF13234 - DEAD/DEAH box helicase (DEAD) // DSHCT (NUC185) domain (DSHCT) // rRNA-processing arch domain (rRNA_proc-arch) M. pusilla CCMP1545 v3.0 4326   scaffold_5: 877924-882249
gw2.04.13.1 (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) M. sp RCC299 v3.0 3342   Chr_04: 837796-841137
gwEuk.1.78.1 (1 of 1) PF00270//PF08148//PF13234 - DEAD/DEAH box helicase (DEAD) // DSHCT (NUC185) domain (DSHCT) // rRNA-processing arch domain (rRNA_proc-arch) O. lucimarinus v2.0 3690   Chr_1: 543583-547272
Thecc1EG041685 (1 of 1) K12599 - antiviral helicase SKI2 (SKI2, SKIV2L) T. cacao v1.1 17674   scaffold_9: 39079934-39097607
Migut.D00864 (1 of 1) PTHR12131//PTHR12131:SF4 - ATP-DEPENDENT RNA AND DNA HELICASE M. guttatus v2.0 15332   scaffold_4: 4211747-4227078
Araha.1403s0007 (1 of 1) PTHR12131//PTHR12131:SF4 - ATP-DEPENDENT RNA AND DNA HELICASE A. halleri v1.1 7455   Scaffold1403: 21049-28503
Cagra.0448s0036 (1 of 1) PTHR12131//PTHR12131:SF4 - ATP-DEPENDENT RNA AND DNA HELICASE C. grandiflora v1.1 7241   Scaffold448: 123446-130686
Glyma.18G067400 (1 of 4) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) G. max Wm82.a2.v1 15606   Chr18: 6246475-6262080
Brara.F01782 (1 of 4) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) B. rapa FPsc v1.3 7108   A06: 11256525-11263632
Bostr.18473s0263 (1 of 1) PTHR12131//PTHR12131:SF4 - ATP-DEPENDENT RNA AND DNA HELICASE B. stricta v1.2 7474   Scaffold18473: 1503166-1510639
Cre11.g482483 (1 of 1) K12599 - antiviral helicase SKI2 (SKI2, SKIV2L) C. reinhardtii v5.6 16371   chromosome_11: 3655973-3672343
Medtr3g462290 (1 of 1) PTHR12131//PTHR12131:SF4 - ATP-DEPENDENT RNA AND DNA HELICASE M. truncatula Mt4.0v1 18033   chr3: 24853513-24871545
SapurV1A.0128s0530 (1 of 1) K12599 - antiviral helicase SKI2 (SKI2, SKIV2L) S. purpurea v1.0 14639   chr09: 3233090-3247728
evm_27.TU.AmTr_v1.0_scaffold00029.298 (1 of 3) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) A. trichopoda v1.0 45133   AmTr_v1.0_scaffold00029: 3924829-3969961
Traes_6DS_7ECADBFD1 (1 of 10) PF00270//PF00271//PF08148//PF13234 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // DSHCT (NUC185) domain (DSHCT) // rRNA-processing arch domain (rRNA_proc-arch) T. aestivum v2.2 14702   ta_iwgsc_6ds_v1_1830945: 20-14721
Eucgr.B02279 (1 of 1) PTHR12131//PTHR12131:SF4 - ATP-DEPENDENT RNA AND DNA HELICASE E. grandis v2.0 21724   Chr02: 41869017-41890740
Prupe.6G062900 (1 of 1) PTHR12131//PTHR12131:SF4 - ATP-DEPENDENT RNA AND DNA HELICASE P. persica v2.1 13211   Pp06: 4338727-4351937
GSMUA_Achr9G03710_001 (1 of 1) PTHR12131//PTHR12131:SF4 - ATP-DEPENDENT RNA AND DNA HELICASE M. acuminata v1 20642   chr9: 2543067-2563708
Manes.01G165300 (1 of 1) PTHR12131//PTHR12131:SF4 - ATP-DEPENDENT RNA AND DNA HELICASE M. esculenta v6.1 25726   Chromosome01: 27039916-27065641
Kalax.0136s0051 (1 of 2) PTHR12131//PTHR12131:SF4 - ATP-DEPENDENT RNA AND DNA HELICASE K. laxiflora v1.1 7244   scaffold_136: 265939-273182

68 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
403447 S. moellendorffii v1.0 123424218 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
29751.m001800 R. communis v0.1 123424218 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
Cucsa.146840.1 C. sativus v1.0 123424218 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
orange1.1g039491m C. sinensis v1.1 123424218 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
AT3G46960.1 A. thaliana TAIR10 123424218 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
Thhalv10010069m E. salsugineum v1.0 123424218 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
Ciclev10027687m C. clementina v1.0 123424218 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
Lus10017528 L. usitatissimum v1.0 123424218 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
Gorai.003G125100.1 G. raimondii v2.1 123424218 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
19229 C. subellipsoidea C-169 v2.0 123424218 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
186344 M. pusilla CCMP1545 v3.0 123424218 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
65181 M. sp RCC299 v3.0 123424218 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
805 O. lucimarinus v2.0 123424218 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
Thecc1EG041685t1 T. cacao v1.1 123424218 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
Migut.D00864.1.p M. guttatus v2.0 123424218 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
Araha.1403s0007.1.p A. halleri v1.1 123424218 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
Cagra.0448s0036.1.p C. grandiflora v1.1 123424218 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
Glyma.18G067400.1.p G. max Wm82.a2.v1 123424218 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
Brara.F01782.1.p B. rapa FPsc v1.3 123424218 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
Bostr.18473s0263.1.p B. stricta v1.2 123424218 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
Cre11.g482483.t1.1 C. reinhardtii v5.6 123424218 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
Medtr3g462290.1 M. truncatula Mt4.0v1 123424218 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
SapurV1A.0128s0530.1.p S. purpurea v1.0 123424218 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
evm_27.model.AmTr_v1.0_scaffold00029.298 A. trichopoda v1.0 123424218 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
Traes_6DS_7ECADBFD1.2 T. aestivum v2.2 123424218 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
Eucgr.B02279.1.p E. grandis v2.0 123424218 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
Prupe.6G062900.1.p P. persica v2.1 123424218 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
GSMUA_Achr9P03710_001 M. acuminata v1 123424218 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
Manes.01G165300.1.p M. esculenta v6.1 123424218 RNA helicase, ATP-dependent, SK12/DOB1 protein 1 5275 Viridiplantae
Kalax.0136s0051.1.p K. laxiflora v1.1 123424218 RNA helicase, ATP-dependent, SK12/DOB1 protein 2 5275 Viridiplantae