Gene : Glyma.18G067400 G. max Wm82.a2.v1
Defline:  (1 of 4) PF13234 - rRNA-processing arch domain (rRNA_proc-arch) Genomic Order:  674
Name:  ? Glyma.18G067400 Secondary Identifier:  ? PAC:30558543
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G067400 0.5kb upstream 0.5kb upstream 16106 true Chr18: 6245975-6262080 Glycine max
Glyma.18G067400 0.5kb upstream 0.5kb upstream 500 false Chr18: 6245975-6246474 Glycine max
Glyma.18G067400 0.5kb downstream 0.5kb downstream 16106 true Chr18: 6246475-6262580 Glycine max
Glyma.18G067400 0.5kb downstream 0.5kb downstream 500 false Chr18: 6262081-6262580 Glycine max
Glyma.18G067400 1.0kb upstream 1.0kb upstream 16606 true Chr18: 6245475-6262080 Glycine max
Glyma.18G067400 1.0kb upstream 1.0kb upstream 1000 false Chr18: 6245475-6246474 Glycine max
Glyma.18G067400 1.0kb downstream 1.0kb downstream 16606 true Chr18: 6246475-6263080 Glycine max
Glyma.18G067400 1.0kb downstream 1.0kb downstream 1000 false Chr18: 6262081-6263080 Glycine max
Glyma.18G067400 2.0kb upstream 2.0kb upstream 17606 true Chr18: 6244475-6262080 Glycine max
Glyma.18G067400 2.0kb upstream 2.0kb upstream 2000 false Chr18: 6244475-6246474 Glycine max
Glyma.18G067400 2.0kb downstream 2.0kb downstream 17606 true Chr18: 6246475-6264080 Glycine max
Glyma.18G067400 2.0kb downstream 2.0kb downstream 2000 false Chr18: 6262081-6264080 Glycine max
Glyma.18G067400 5.0kb upstream 5.0kb upstream 20606 true Chr18: 6241475-6262080 Glycine max
Glyma.18G067400 5.0kb upstream 5.0kb upstream 5000 false Chr18: 6241475-6246474 Glycine max
Glyma.18G067400 5.0kb downstream 5.0kb downstream 20606 true Chr18: 6246475-6267080 Glycine max
Glyma.18G067400 5.0kb downstream 5.0kb downstream 5000 false Chr18: 6262081-6267080 Glycine max
Glyma.18G067400 10.0kb upstream 10.0kb upstream 25606 true Chr18: 6236475-6262080 Glycine max
Glyma.18G067400 10.0kb upstream 10.0kb upstream 10000 false Chr18: 6236475-6246474 Glycine max
Glyma.18G067400 10.0kb downstream 10.0kb downstream 25606 true Chr18: 6246475-6272080 Glycine max
Glyma.18G067400 10.0kb downstream 10.0kb downstream 10000 false Chr18: 6262081-6272080 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305146 5265 Fabidae View MSA
124064775 5270 Rosid View MSA
123739917 5271 Pentapetalae View MSA
122788898 5272 Eudicot View MSA
122042140 5273 Angiosperm View MSA
121344115 5274 Embryophyte View MSA
123424218 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.2498 0.0 16.6737    
cufflinks 6.4461 0.0 17.1983    
cufflinks 5.58847 0.0 14.915    
cufflinks 5.19705 0.0 13.886    
cufflinks 4.13377 0.0 11.125    
cufflinks 2.93834 0.0 8.06166   Low
cufflinks 6.01019 0.0 16.0368    
cufflinks 6.01979 0.0 16.0606    
cufflinks 4.13996 0.0 11.1369    
cufflinks 1.712        
cufflinks 1.074       Low
cufflinks 2.282        
cufflinks 1.589        
cufflinks 1.641        
cufflinks 2.482        
cufflinks 2.956       High
cufflinks 1.421       Low
cufflinks 2.508        
cufflinks 3.493       High
cufflinks 2.666        
cufflinks 1.376       Low
cufflinks 2.925       High
cufflinks 2.731        
cufflinks 1.175       Low
cufflinks 2.751        
cufflinks 1.885        

0 Strain