Gene : Cagra.0001s0009 C. grandiflora v1.1
Defline:  (1 of 3) PTHR22847//PTHR22847:SF478 - WD40 REPEAT PROTEIN Genomic Order:  9
Name:  ? Cagra.0001s0009 Secondary Identifier:  ? PAC:28894710
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0001s0009 0.5kb upstream 0.5kb upstream 3732 true Scaffold1: 40208-43939 Capsella grandiflora
Cagra.0001s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold1: 40208-40707 Capsella grandiflora
Cagra.0001s0009 0.5kb downstream 0.5kb downstream 3732 true Scaffold1: 40708-44439 Capsella grandiflora
Cagra.0001s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold1: 43940-44439 Capsella grandiflora
Cagra.0001s0009 1.0kb upstream 1.0kb upstream 4232 true Scaffold1: 39708-43939 Capsella grandiflora
Cagra.0001s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold1: 39708-40707 Capsella grandiflora
Cagra.0001s0009 1.0kb downstream 1.0kb downstream 4232 true Scaffold1: 40708-44939 Capsella grandiflora
Cagra.0001s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold1: 43940-44939 Capsella grandiflora
Cagra.0001s0009 2.0kb upstream 2.0kb upstream 5232 true Scaffold1: 38708-43939 Capsella grandiflora
Cagra.0001s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold1: 38708-40707 Capsella grandiflora
Cagra.0001s0009 2.0kb downstream 2.0kb downstream 5232 true Scaffold1: 40708-45939 Capsella grandiflora
Cagra.0001s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold1: 43940-45939 Capsella grandiflora
Cagra.0001s0009 5.0kb upstream 5.0kb upstream 8232 true Scaffold1: 35708-43939 Capsella grandiflora
Cagra.0001s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold1: 35708-40707 Capsella grandiflora
Cagra.0001s0009 5.0kb downstream 5.0kb downstream 8232 true Scaffold1: 40708-48939 Capsella grandiflora
Cagra.0001s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold1: 43940-48939 Capsella grandiflora
Cagra.0001s0009 10.0kb upstream 10.0kb upstream 13232 true Scaffold1: 30708-43939 Capsella grandiflora
Cagra.0001s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold1: 30708-40707 Capsella grandiflora
Cagra.0001s0009 10.0kb downstream 10.0kb downstream 13232 true Scaffold1: 40708-53939 Capsella grandiflora
Cagra.0001s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold1: 43940-53939 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041408 5273 Angiosperm View MSA
122373823 5261 Brassicaceae View MSA
123836250 5264 Brassicales-Malvales View MSA
124350109 5266 SBM View MSA
124245380 5268 Malvidae View MSA
124065588 5270 Rosid View MSA
123745758 5271 Pentapetalae View MSA
122795577 5272 Eudicot View MSA
121348063 5274 Embryophyte View MSA
123428605 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain