Gene : Cagra.0001s0015 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11689:SF77 - CHLORIDE CHANNEL PROTEIN CLC-F Genomic Order:  15
Name:  ? Cagra.0001s0015 Secondary Identifier:  ? PAC:28894728
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0001s0015 0.5kb upstream 0.5kb upstream 4530 true Scaffold1: 53872-58401 Capsella grandiflora
Cagra.0001s0015 0.5kb upstream 0.5kb upstream 500 false Scaffold1: 53872-54371 Capsella grandiflora
Cagra.0001s0015 0.5kb downstream 0.5kb downstream 4530 true Scaffold1: 54372-58901 Capsella grandiflora
Cagra.0001s0015 0.5kb downstream 0.5kb downstream 500 false Scaffold1: 58402-58901 Capsella grandiflora
Cagra.0001s0015 1.0kb upstream 1.0kb upstream 5030 true Scaffold1: 53372-58401 Capsella grandiflora
Cagra.0001s0015 1.0kb upstream 1.0kb upstream 1000 false Scaffold1: 53372-54371 Capsella grandiflora
Cagra.0001s0015 1.0kb downstream 1.0kb downstream 5030 true Scaffold1: 54372-59401 Capsella grandiflora
Cagra.0001s0015 1.0kb downstream 1.0kb downstream 1000 false Scaffold1: 58402-59401 Capsella grandiflora
Cagra.0001s0015 2.0kb upstream 2.0kb upstream 6030 true Scaffold1: 52372-58401 Capsella grandiflora
Cagra.0001s0015 2.0kb upstream 2.0kb upstream 2000 false Scaffold1: 52372-54371 Capsella grandiflora
Cagra.0001s0015 2.0kb downstream 2.0kb downstream 6030 true Scaffold1: 54372-60401 Capsella grandiflora
Cagra.0001s0015 2.0kb downstream 2.0kb downstream 2000 false Scaffold1: 58402-60401 Capsella grandiflora
Cagra.0001s0015 5.0kb upstream 5.0kb upstream 9030 true Scaffold1: 49372-58401 Capsella grandiflora
Cagra.0001s0015 5.0kb upstream 5.0kb upstream 5000 false Scaffold1: 49372-54371 Capsella grandiflora
Cagra.0001s0015 5.0kb downstream 5.0kb downstream 9030 true Scaffold1: 54372-63401 Capsella grandiflora
Cagra.0001s0015 5.0kb downstream 5.0kb downstream 5000 false Scaffold1: 58402-63401 Capsella grandiflora
Cagra.0001s0015 10.0kb upstream 10.0kb upstream 14030 true Scaffold1: 44372-58401 Capsella grandiflora
Cagra.0001s0015 10.0kb upstream 10.0kb upstream 10000 false Scaffold1: 44372-54371 Capsella grandiflora
Cagra.0001s0015 10.0kb downstream 10.0kb downstream 14030 true Scaffold1: 54372-68401 Capsella grandiflora
Cagra.0001s0015 10.0kb downstream 10.0kb downstream 10000 false Scaffold1: 58402-68401 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377271 5261 Brassicaceae View MSA
123828322 5264 Brassicales-Malvales View MSA
124342569 5266 SBM View MSA
124252989 5268 Malvidae View MSA
124064511 5270 Rosid View MSA
123748133 5271 Pentapetalae View MSA
122793511 5272 Eudicot View MSA
122047702 5273 Angiosperm View MSA
121347705 5274 Embryophyte View MSA
123427001 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain