Gene : Cagra.0003s0041 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31867:SF5 - EXPANSIN-A16-RELATED Genomic Order:  41
Name:  ? Cagra.0003s0041 Secondary Identifier:  ? PAC:28913305
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0003s0041 0.5kb upstream 0.5kb upstream 1882 true Scaffold3: 144181-146062 Capsella grandiflora
Cagra.0003s0041 0.5kb upstream 0.5kb upstream 500 false Scaffold3: 144181-144680 Capsella grandiflora
Cagra.0003s0041 0.5kb downstream 0.5kb downstream 1882 true Scaffold3: 144681-146562 Capsella grandiflora
Cagra.0003s0041 0.5kb downstream 0.5kb downstream 500 false Scaffold3: 146063-146562 Capsella grandiflora
Cagra.0003s0041 1.0kb upstream 1.0kb upstream 2382 true Scaffold3: 143681-146062 Capsella grandiflora
Cagra.0003s0041 1.0kb upstream 1.0kb upstream 1000 false Scaffold3: 143681-144680 Capsella grandiflora
Cagra.0003s0041 1.0kb downstream 1.0kb downstream 2382 true Scaffold3: 144681-147062 Capsella grandiflora
Cagra.0003s0041 1.0kb downstream 1.0kb downstream 1000 false Scaffold3: 146063-147062 Capsella grandiflora
Cagra.0003s0041 2.0kb upstream 2.0kb upstream 3382 true Scaffold3: 142681-146062 Capsella grandiflora
Cagra.0003s0041 2.0kb upstream 2.0kb upstream 2000 false Scaffold3: 142681-144680 Capsella grandiflora
Cagra.0003s0041 2.0kb downstream 2.0kb downstream 3382 true Scaffold3: 144681-148062 Capsella grandiflora
Cagra.0003s0041 2.0kb downstream 2.0kb downstream 2000 false Scaffold3: 146063-148062 Capsella grandiflora
Cagra.0003s0041 5.0kb upstream 5.0kb upstream 6382 true Scaffold3: 139681-146062 Capsella grandiflora
Cagra.0003s0041 5.0kb upstream 5.0kb upstream 5000 false Scaffold3: 139681-144680 Capsella grandiflora
Cagra.0003s0041 5.0kb downstream 5.0kb downstream 4624 true Scaffold3: 144681-149304 Capsella grandiflora
Cagra.0003s0041 5.0kb downstream 5.0kb downstream 3242 false Scaffold3: 146063-149304 Capsella grandiflora
Cagra.0003s0041 10.0kb upstream 10.0kb upstream 11382 true Scaffold3: 134681-146062 Capsella grandiflora
Cagra.0003s0041 10.0kb upstream 10.0kb upstream 10000 false Scaffold3: 134681-144680 Capsella grandiflora
Cagra.0003s0041 10.0kb downstream 10.0kb downstream 4624 true Scaffold3: 144681-149304 Capsella grandiflora
Cagra.0003s0041 10.0kb downstream 10.0kb downstream 3242 false Scaffold3: 146063-149304 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375031 5261 Brassicaceae View MSA
123800866 5264 Brassicales-Malvales View MSA
124298229 5266 SBM View MSA
124149924 5268 Malvidae View MSA
123875637 5270 Rosid View MSA
123459428 5271 Pentapetalae View MSA
122494819 5272 Eudicot View MSA
122047888 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain