Gene : Cagra.0173s0008 C. grandiflora v1.1
Defline:  (1 of 1) PTHR30508:SF1 - UPF0051 PROTEIN ABCI8, CHLOROPLASTIC-RELATED Genomic Order:  8
Name:  ? Cagra.0173s0008 Secondary Identifier:  ? PAC:28913261
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0173s0008 0.5kb upstream 0.5kb upstream 2554 true Scaffold173: 31918-34471 Capsella grandiflora
Cagra.0173s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold173: 31918-32417 Capsella grandiflora
Cagra.0173s0008 0.5kb downstream 0.5kb downstream 2554 true Scaffold173: 32418-34971 Capsella grandiflora
Cagra.0173s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold173: 34472-34971 Capsella grandiflora
Cagra.0173s0008 1.0kb upstream 1.0kb upstream 3054 true Scaffold173: 31418-34471 Capsella grandiflora
Cagra.0173s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold173: 31418-32417 Capsella grandiflora
Cagra.0173s0008 1.0kb downstream 1.0kb downstream 3054 true Scaffold173: 32418-35471 Capsella grandiflora
Cagra.0173s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold173: 34472-35471 Capsella grandiflora
Cagra.0173s0008 2.0kb upstream 2.0kb upstream 4054 true Scaffold173: 30418-34471 Capsella grandiflora
Cagra.0173s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold173: 30418-32417 Capsella grandiflora
Cagra.0173s0008 2.0kb downstream 2.0kb downstream 4054 true Scaffold173: 32418-36471 Capsella grandiflora
Cagra.0173s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold173: 34472-36471 Capsella grandiflora
Cagra.0173s0008 5.0kb upstream 5.0kb upstream 7054 true Scaffold173: 27418-34471 Capsella grandiflora
Cagra.0173s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold173: 27418-32417 Capsella grandiflora
Cagra.0173s0008 5.0kb downstream 5.0kb downstream 7054 true Scaffold173: 32418-39471 Capsella grandiflora
Cagra.0173s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold173: 34472-39471 Capsella grandiflora
Cagra.0173s0008 10.0kb upstream 10.0kb upstream 12054 true Scaffold173: 22418-34471 Capsella grandiflora
Cagra.0173s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold173: 22418-32417 Capsella grandiflora
Cagra.0173s0008 10.0kb downstream 10.0kb downstream 12054 true Scaffold173: 32418-44471 Capsella grandiflora
Cagra.0173s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold173: 34472-44471 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370793 5261 Brassicaceae View MSA
123832669 5264 Brassicales-Malvales View MSA
124340855 5266 SBM View MSA
124241933 5268 Malvidae View MSA
124060841 5270 Rosid View MSA
123742833 5271 Pentapetalae View MSA
122792679 5272 Eudicot View MSA
122051474 5273 Angiosperm View MSA
121345946 5274 Embryophyte View MSA
123424242 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain