Gene : Cagra.0179s0028 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10168:SF112 - GLUTAREDOXIN-C4 Genomic Order:  28
Name:  ? Cagra.0179s0028 Secondary Identifier:  ? PAC:28909708
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora THIOREDOX-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0179s0028 0.5kb upstream 0.5kb upstream 2304 true Scaffold179: 118958-121261 Capsella grandiflora
Cagra.0179s0028 0.5kb upstream 0.5kb upstream 500 false Scaffold179: 118958-119457 Capsella grandiflora
Cagra.0179s0028 0.5kb downstream 0.5kb downstream 2304 true Scaffold179: 119458-121761 Capsella grandiflora
Cagra.0179s0028 0.5kb downstream 0.5kb downstream 500 false Scaffold179: 121262-121761 Capsella grandiflora
Cagra.0179s0028 1.0kb upstream 1.0kb upstream 2804 true Scaffold179: 118458-121261 Capsella grandiflora
Cagra.0179s0028 1.0kb upstream 1.0kb upstream 1000 false Scaffold179: 118458-119457 Capsella grandiflora
Cagra.0179s0028 1.0kb downstream 1.0kb downstream 2804 true Scaffold179: 119458-122261 Capsella grandiflora
Cagra.0179s0028 1.0kb downstream 1.0kb downstream 1000 false Scaffold179: 121262-122261 Capsella grandiflora
Cagra.0179s0028 2.0kb upstream 2.0kb upstream 3804 true Scaffold179: 117458-121261 Capsella grandiflora
Cagra.0179s0028 2.0kb upstream 2.0kb upstream 2000 false Scaffold179: 117458-119457 Capsella grandiflora
Cagra.0179s0028 2.0kb downstream 2.0kb downstream 3804 true Scaffold179: 119458-123261 Capsella grandiflora
Cagra.0179s0028 2.0kb downstream 2.0kb downstream 2000 false Scaffold179: 121262-123261 Capsella grandiflora
Cagra.0179s0028 5.0kb upstream 5.0kb upstream 6804 true Scaffold179: 114458-121261 Capsella grandiflora
Cagra.0179s0028 5.0kb upstream 5.0kb upstream 5000 false Scaffold179: 114458-119457 Capsella grandiflora
Cagra.0179s0028 5.0kb downstream 5.0kb downstream 6804 true Scaffold179: 119458-126261 Capsella grandiflora
Cagra.0179s0028 5.0kb downstream 5.0kb downstream 5000 false Scaffold179: 121262-126261 Capsella grandiflora
Cagra.0179s0028 10.0kb upstream 10.0kb upstream 11804 true Scaffold179: 109458-121261 Capsella grandiflora
Cagra.0179s0028 10.0kb upstream 10.0kb upstream 10000 false Scaffold179: 109458-119457 Capsella grandiflora
Cagra.0179s0028 10.0kb downstream 10.0kb downstream 11804 true Scaffold179: 119458-131261 Capsella grandiflora
Cagra.0179s0028 10.0kb downstream 10.0kb downstream 10000 false Scaffold179: 121262-131261 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364139 5261 Brassicaceae View MSA
123830349 5264 Brassicales-Malvales View MSA
124321666 5266 SBM View MSA
124251617 5268 Malvidae View MSA
124064046 5270 Rosid View MSA
123741506 5271 Pentapetalae View MSA
122793687 5272 Eudicot View MSA
122043796 5273 Angiosperm View MSA
121344746 5274 Embryophyte View MSA
123428660 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain