Gene : Cagra.0179s0038 C. grandiflora v1.1
Defline:  (1 of 11) PF10358 - N-terminal C2 in EEIG1 and EHBP1 proteins (NT-C2) Genomic Order:  38
Name:  ? Cagra.0179s0038 Secondary Identifier:  ? PAC:28909745
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0179s0038 0.5kb upstream 0.5kb upstream 4567 true Scaffold179: 154710-159276 Capsella grandiflora
Cagra.0179s0038 0.5kb upstream 0.5kb upstream 500 false Scaffold179: 154710-155209 Capsella grandiflora
Cagra.0179s0038 0.5kb downstream 0.5kb downstream 4567 true Scaffold179: 155210-159776 Capsella grandiflora
Cagra.0179s0038 0.5kb downstream 0.5kb downstream 500 false Scaffold179: 159277-159776 Capsella grandiflora
Cagra.0179s0038 1.0kb upstream 1.0kb upstream 5067 true Scaffold179: 154210-159276 Capsella grandiflora
Cagra.0179s0038 1.0kb upstream 1.0kb upstream 1000 false Scaffold179: 154210-155209 Capsella grandiflora
Cagra.0179s0038 1.0kb downstream 1.0kb downstream 5067 true Scaffold179: 155210-160276 Capsella grandiflora
Cagra.0179s0038 1.0kb downstream 1.0kb downstream 1000 false Scaffold179: 159277-160276 Capsella grandiflora
Cagra.0179s0038 2.0kb upstream 2.0kb upstream 6067 true Scaffold179: 153210-159276 Capsella grandiflora
Cagra.0179s0038 2.0kb upstream 2.0kb upstream 2000 false Scaffold179: 153210-155209 Capsella grandiflora
Cagra.0179s0038 2.0kb downstream 2.0kb downstream 6067 true Scaffold179: 155210-161276 Capsella grandiflora
Cagra.0179s0038 2.0kb downstream 2.0kb downstream 2000 false Scaffold179: 159277-161276 Capsella grandiflora
Cagra.0179s0038 5.0kb upstream 5.0kb upstream 9067 true Scaffold179: 150210-159276 Capsella grandiflora
Cagra.0179s0038 5.0kb upstream 5.0kb upstream 5000 false Scaffold179: 150210-155209 Capsella grandiflora
Cagra.0179s0038 5.0kb downstream 5.0kb downstream 9067 true Scaffold179: 155210-164276 Capsella grandiflora
Cagra.0179s0038 5.0kb downstream 5.0kb downstream 5000 false Scaffold179: 159277-164276 Capsella grandiflora
Cagra.0179s0038 10.0kb upstream 10.0kb upstream 14067 true Scaffold179: 145210-159276 Capsella grandiflora
Cagra.0179s0038 10.0kb upstream 10.0kb upstream 10000 false Scaffold179: 145210-155209 Capsella grandiflora
Cagra.0179s0038 10.0kb downstream 10.0kb downstream 14067 true Scaffold179: 155210-169276 Capsella grandiflora
Cagra.0179s0038 10.0kb downstream 10.0kb downstream 10000 false Scaffold179: 159277-169276 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041160 5273 Angiosperm View MSA
122376711 5261 Brassicaceae View MSA
123835267 5264 Brassicales-Malvales View MSA
124341662 5266 SBM View MSA
124243752 5268 Malvidae View MSA
124072926 5270 Rosid View MSA
123747985 5271 Pentapetalae View MSA
122787610 5272 Eudicot View MSA
121351734 5274 Embryophyte View MSA
123382297 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain