Gene : Cagra.0202s0009 C. grandiflora v1.1
Defline:  (1 of 4) 1.5.3.16//1.5.3.17 - Spermine oxidase / SMO // Non-specific polyamine oxidase / Polyamine oxidase Genomic Order:  9
Name:  ? Cagra.0202s0009 Secondary Identifier:  ? PAC:28919089
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6441 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0202s0009 0.5kb upstream 0.5kb upstream 3671 true Scaffold202: 27636-31306 Capsella grandiflora
Cagra.0202s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold202: 30807-31306 Capsella grandiflora
Cagra.0202s0009 0.5kb downstream 0.5kb downstream 3671 true Scaffold202: 27136-30806 Capsella grandiflora
Cagra.0202s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold202: 27136-27635 Capsella grandiflora
Cagra.0202s0009 1.0kb upstream 1.0kb upstream 4171 true Scaffold202: 27636-31806 Capsella grandiflora
Cagra.0202s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold202: 30807-31806 Capsella grandiflora
Cagra.0202s0009 1.0kb downstream 1.0kb downstream 4171 true Scaffold202: 26636-30806 Capsella grandiflora
Cagra.0202s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold202: 26636-27635 Capsella grandiflora
Cagra.0202s0009 2.0kb upstream 2.0kb upstream 5171 true Scaffold202: 27636-32806 Capsella grandiflora
Cagra.0202s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold202: 30807-32806 Capsella grandiflora
Cagra.0202s0009 2.0kb downstream 2.0kb downstream 5171 true Scaffold202: 25636-30806 Capsella grandiflora
Cagra.0202s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold202: 25636-27635 Capsella grandiflora
Cagra.0202s0009 5.0kb upstream 5.0kb upstream 8171 true Scaffold202: 27636-35806 Capsella grandiflora
Cagra.0202s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold202: 30807-35806 Capsella grandiflora
Cagra.0202s0009 5.0kb downstream 5.0kb downstream 8171 true Scaffold202: 22636-30806 Capsella grandiflora
Cagra.0202s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold202: 22636-27635 Capsella grandiflora
Cagra.0202s0009 10.0kb upstream 10.0kb upstream 13171 true Scaffold202: 27636-40806 Capsella grandiflora
Cagra.0202s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold202: 30807-40806 Capsella grandiflora
Cagra.0202s0009 10.0kb downstream 10.0kb downstream 13171 true Scaffold202: 17636-30806 Capsella grandiflora
Cagra.0202s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold202: 17636-27635 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373356 5261 Brassicaceae View MSA
123831271 5264 Brassicales-Malvales View MSA
124342575 5266 SBM View MSA
124244923 5268 Malvidae View MSA
124065173 5270 Rosid View MSA
123745734 5271 Pentapetalae View MSA
122788869 5272 Eudicot View MSA
122044597 5273 Angiosperm View MSA
121345919 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain