Gene : Cagra.0202s0017 C. grandiflora v1.1
Defline:  (1 of 1) PTHR21535//PTHR21535:SF50 - MAGNESIUM AND COBALT TRANSPORT PROTEIN/MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM8 Genomic Order:  17
Name:  ? Cagra.0202s0017 Secondary Identifier:  ? PAC:28919074
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0202s0017 0.5kb upstream 0.5kb upstream 3350 true Scaffold202: 55379-58728 Capsella grandiflora
Cagra.0202s0017 0.5kb upstream 0.5kb upstream 500 false Scaffold202: 58229-58728 Capsella grandiflora
Cagra.0202s0017 0.5kb downstream 0.5kb downstream 3350 true Scaffold202: 54879-58228 Capsella grandiflora
Cagra.0202s0017 0.5kb downstream 0.5kb downstream 500 false Scaffold202: 54879-55378 Capsella grandiflora
Cagra.0202s0017 1.0kb upstream 1.0kb upstream 3850 true Scaffold202: 55379-59228 Capsella grandiflora
Cagra.0202s0017 1.0kb upstream 1.0kb upstream 1000 false Scaffold202: 58229-59228 Capsella grandiflora
Cagra.0202s0017 1.0kb downstream 1.0kb downstream 3850 true Scaffold202: 54379-58228 Capsella grandiflora
Cagra.0202s0017 1.0kb downstream 1.0kb downstream 1000 false Scaffold202: 54379-55378 Capsella grandiflora
Cagra.0202s0017 2.0kb upstream 2.0kb upstream 4850 true Scaffold202: 55379-60228 Capsella grandiflora
Cagra.0202s0017 2.0kb upstream 2.0kb upstream 2000 false Scaffold202: 58229-60228 Capsella grandiflora
Cagra.0202s0017 2.0kb downstream 2.0kb downstream 4850 true Scaffold202: 53379-58228 Capsella grandiflora
Cagra.0202s0017 2.0kb downstream 2.0kb downstream 2000 false Scaffold202: 53379-55378 Capsella grandiflora
Cagra.0202s0017 5.0kb upstream 5.0kb upstream 7850 true Scaffold202: 55379-63228 Capsella grandiflora
Cagra.0202s0017 5.0kb upstream 5.0kb upstream 5000 false Scaffold202: 58229-63228 Capsella grandiflora
Cagra.0202s0017 5.0kb downstream 5.0kb downstream 7850 true Scaffold202: 50379-58228 Capsella grandiflora
Cagra.0202s0017 5.0kb downstream 5.0kb downstream 5000 false Scaffold202: 50379-55378 Capsella grandiflora
Cagra.0202s0017 10.0kb upstream 10.0kb upstream 12850 true Scaffold202: 55379-68228 Capsella grandiflora
Cagra.0202s0017 10.0kb upstream 10.0kb upstream 10000 false Scaffold202: 58229-68228 Capsella grandiflora
Cagra.0202s0017 10.0kb downstream 10.0kb downstream 12850 true Scaffold202: 45379-58228 Capsella grandiflora
Cagra.0202s0017 10.0kb downstream 10.0kb downstream 10000 false Scaffold202: 45379-55378 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373545 5261 Brassicaceae View MSA
123838556 5264 Brassicales-Malvales View MSA
124322475 5266 SBM View MSA
124169153 5268 Malvidae View MSA
124050805 5270 Rosid View MSA
123746992 5271 Pentapetalae View MSA
122788455 5272 Eudicot View MSA
122047423 5273 Angiosperm View MSA
121346134 5274 Embryophyte View MSA
123380334 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain