Gene : Cagra.0147s0073 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22573:SF47 - PHOSPHOGLUCOMUTASE, CYTOPLASMIC 1-RELATED Genomic Order:  73
Name:  ? Cagra.0147s0073 Secondary Identifier:  ? PAC:28896419
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora GLUCOSE1PMETAB-PWY Capsella grandiflora pathologic  
Cgrandiflora GLYCOGENSYNTH-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-3801 Capsella grandiflora pathologic  
Cgrandiflora PWY-622 Capsella grandiflora pathologic  
Cgrandiflora PWY66-422 Capsella grandiflora pathologic  
Cgrandiflora PWY-7238 Capsella grandiflora pathologic  
Cgrandiflora PWY-7343 Capsella grandiflora pathologic  
Cgrandiflora SUCSYN-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0147s0073 0.5kb upstream 0.5kb upstream 5275 true Scaffold147: 285253-290527 Capsella grandiflora
Cagra.0147s0073 0.5kb upstream 0.5kb upstream 500 false Scaffold147: 285253-285752 Capsella grandiflora
Cagra.0147s0073 0.5kb downstream 0.5kb downstream 5275 true Scaffold147: 285753-291027 Capsella grandiflora
Cagra.0147s0073 0.5kb downstream 0.5kb downstream 500 false Scaffold147: 290528-291027 Capsella grandiflora
Cagra.0147s0073 1.0kb upstream 1.0kb upstream 5775 true Scaffold147: 284753-290527 Capsella grandiflora
Cagra.0147s0073 1.0kb upstream 1.0kb upstream 1000 false Scaffold147: 284753-285752 Capsella grandiflora
Cagra.0147s0073 1.0kb downstream 1.0kb downstream 5775 true Scaffold147: 285753-291527 Capsella grandiflora
Cagra.0147s0073 1.0kb downstream 1.0kb downstream 1000 false Scaffold147: 290528-291527 Capsella grandiflora
Cagra.0147s0073 2.0kb upstream 2.0kb upstream 6775 true Scaffold147: 283753-290527 Capsella grandiflora
Cagra.0147s0073 2.0kb upstream 2.0kb upstream 2000 false Scaffold147: 283753-285752 Capsella grandiflora
Cagra.0147s0073 2.0kb downstream 2.0kb downstream 5977 true Scaffold147: 285753-291729 Capsella grandiflora
Cagra.0147s0073 2.0kb downstream 2.0kb downstream 1202 false Scaffold147: 290528-291729 Capsella grandiflora
Cagra.0147s0073 5.0kb upstream 5.0kb upstream 9775 true Scaffold147: 280753-290527 Capsella grandiflora
Cagra.0147s0073 5.0kb upstream 5.0kb upstream 5000 false Scaffold147: 280753-285752 Capsella grandiflora
Cagra.0147s0073 5.0kb downstream 5.0kb downstream 5977 true Scaffold147: 285753-291729 Capsella grandiflora
Cagra.0147s0073 5.0kb downstream 5.0kb downstream 1202 false Scaffold147: 290528-291729 Capsella grandiflora
Cagra.0147s0073 10.0kb upstream 10.0kb upstream 14775 true Scaffold147: 275753-290527 Capsella grandiflora
Cagra.0147s0073 10.0kb upstream 10.0kb upstream 10000 false Scaffold147: 275753-285752 Capsella grandiflora
Cagra.0147s0073 10.0kb downstream 10.0kb downstream 5977 true Scaffold147: 285753-291729 Capsella grandiflora
Cagra.0147s0073 10.0kb downstream 10.0kb downstream 1202 false Scaffold147: 290528-291729 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376242 5261 Brassicaceae View MSA
123835209 5264 Brassicales-Malvales View MSA
124342115 5266 SBM View MSA
124253593 5268 Malvidae View MSA
124065382 5270 Rosid View MSA
123740036 5271 Pentapetalae View MSA
122791577 5272 Eudicot View MSA
122046067 5273 Angiosperm View MSA
121346784 5274 Embryophyte View MSA
123426013 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain