Gene : Cagra.0149s0010 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11119//PTHR11119:SF47 - XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER Genomic Order:  10
Name:  ? Cagra.0149s0010 Secondary Identifier:  ? PAC:28912285
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0149s0010 0.5kb upstream 0.5kb upstream 3122 true Scaffold149: 39262-42383 Capsella grandiflora
Cagra.0149s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold149: 39262-39761 Capsella grandiflora
Cagra.0149s0010 0.5kb downstream 0.5kb downstream 3122 true Scaffold149: 39762-42883 Capsella grandiflora
Cagra.0149s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold149: 42384-42883 Capsella grandiflora
Cagra.0149s0010 1.0kb upstream 1.0kb upstream 3622 true Scaffold149: 38762-42383 Capsella grandiflora
Cagra.0149s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold149: 38762-39761 Capsella grandiflora
Cagra.0149s0010 1.0kb downstream 1.0kb downstream 3622 true Scaffold149: 39762-43383 Capsella grandiflora
Cagra.0149s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold149: 42384-43383 Capsella grandiflora
Cagra.0149s0010 2.0kb upstream 2.0kb upstream 4622 true Scaffold149: 37762-42383 Capsella grandiflora
Cagra.0149s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold149: 37762-39761 Capsella grandiflora
Cagra.0149s0010 2.0kb downstream 2.0kb downstream 4622 true Scaffold149: 39762-44383 Capsella grandiflora
Cagra.0149s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold149: 42384-44383 Capsella grandiflora
Cagra.0149s0010 5.0kb upstream 5.0kb upstream 7622 true Scaffold149: 34762-42383 Capsella grandiflora
Cagra.0149s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold149: 34762-39761 Capsella grandiflora
Cagra.0149s0010 5.0kb downstream 5.0kb downstream 7622 true Scaffold149: 39762-47383 Capsella grandiflora
Cagra.0149s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold149: 42384-47383 Capsella grandiflora
Cagra.0149s0010 10.0kb upstream 10.0kb upstream 12622 true Scaffold149: 29762-42383 Capsella grandiflora
Cagra.0149s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold149: 29762-39761 Capsella grandiflora
Cagra.0149s0010 10.0kb downstream 10.0kb downstream 12622 true Scaffold149: 39762-52383 Capsella grandiflora
Cagra.0149s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold149: 42384-52383 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368986 5261 Brassicaceae View MSA
123829412 5264 Brassicales-Malvales View MSA
124346432 5266 SBM View MSA
124240477 5268 Malvidae View MSA
124067921 5270 Rosid View MSA
123749594 5271 Pentapetalae View MSA
122792857 5272 Eudicot View MSA
122044330 5273 Angiosperm View MSA
121348988 5274 Embryophyte View MSA
123428829 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain