Gene : Cagra.0149s0007 C. grandiflora v1.1
Defline:  (1 of 6) PF01918 - Alba (Alba) Genomic Order:  7
Name:  ? Cagra.0149s0007 Secondary Identifier:  ? PAC:28912277
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0149s0007 0.5kb upstream 0.5kb upstream 1778 true Scaffold149: 28984-30761 Capsella grandiflora
Cagra.0149s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold149: 28984-29483 Capsella grandiflora
Cagra.0149s0007 0.5kb downstream 0.5kb downstream 1778 true Scaffold149: 29484-31261 Capsella grandiflora
Cagra.0149s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold149: 30762-31261 Capsella grandiflora
Cagra.0149s0007 1.0kb upstream 1.0kb upstream 2278 true Scaffold149: 28484-30761 Capsella grandiflora
Cagra.0149s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold149: 28484-29483 Capsella grandiflora
Cagra.0149s0007 1.0kb downstream 1.0kb downstream 2278 true Scaffold149: 29484-31761 Capsella grandiflora
Cagra.0149s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold149: 30762-31761 Capsella grandiflora
Cagra.0149s0007 2.0kb upstream 2.0kb upstream 3278 true Scaffold149: 27484-30761 Capsella grandiflora
Cagra.0149s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold149: 27484-29483 Capsella grandiflora
Cagra.0149s0007 2.0kb downstream 2.0kb downstream 3278 true Scaffold149: 29484-32761 Capsella grandiflora
Cagra.0149s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold149: 30762-32761 Capsella grandiflora
Cagra.0149s0007 5.0kb upstream 5.0kb upstream 6278 true Scaffold149: 24484-30761 Capsella grandiflora
Cagra.0149s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold149: 24484-29483 Capsella grandiflora
Cagra.0149s0007 5.0kb downstream 5.0kb downstream 6278 true Scaffold149: 29484-35761 Capsella grandiflora
Cagra.0149s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold149: 30762-35761 Capsella grandiflora
Cagra.0149s0007 10.0kb upstream 10.0kb upstream 11278 true Scaffold149: 19484-30761 Capsella grandiflora
Cagra.0149s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold149: 19484-29483 Capsella grandiflora
Cagra.0149s0007 10.0kb downstream 10.0kb downstream 11278 true Scaffold149: 29484-40761 Capsella grandiflora
Cagra.0149s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold149: 30762-40761 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370815 5261 Brassicaceae View MSA
123836105 5264 Brassicales-Malvales View MSA
124345416 5266 SBM View MSA
124246125 5268 Malvidae View MSA
124065942 5270 Rosid View MSA
123750255 5271 Pentapetalae View MSA
122795552 5272 Eudicot View MSA
122042167 5273 Angiosperm View MSA
121346259 5274 Embryophyte View MSA
123428257 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain