Gene : Cagra.0154s0002 C. grandiflora v1.1
Defline:  (1 of 2) PTHR14226 - NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER Genomic Order:  2
Name:  ? Cagra.0154s0002 Secondary Identifier:  ? PAC:28918974
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora LIPAS-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0154s0002 0.5kb upstream 0.5kb upstream 3995 true Scaffold154: 906-4900 Capsella grandiflora
Cagra.0154s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold154: 4401-4900 Capsella grandiflora
Cagra.0154s0002 0.5kb downstream 0.5kb downstream 3995 true Scaffold154: 406-4400 Capsella grandiflora
Cagra.0154s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold154: 406-905 Capsella grandiflora
Cagra.0154s0002 1.0kb upstream 1.0kb upstream 4495 true Scaffold154: 906-5400 Capsella grandiflora
Cagra.0154s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold154: 4401-5400 Capsella grandiflora
Cagra.0154s0002 1.0kb downstream 1.0kb downstream 4400 true Scaffold154: 1-4400 Capsella grandiflora
Cagra.0154s0002 1.0kb downstream 1.0kb downstream 905 false Scaffold154: 1-905 Capsella grandiflora
Cagra.0154s0002 2.0kb upstream 2.0kb upstream 5495 true Scaffold154: 906-6400 Capsella grandiflora
Cagra.0154s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold154: 4401-6400 Capsella grandiflora
Cagra.0154s0002 2.0kb downstream 2.0kb downstream 4400 true Scaffold154: 1-4400 Capsella grandiflora
Cagra.0154s0002 2.0kb downstream 2.0kb downstream 905 false Scaffold154: 1-905 Capsella grandiflora
Cagra.0154s0002 5.0kb upstream 5.0kb upstream 8495 true Scaffold154: 906-9400 Capsella grandiflora
Cagra.0154s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold154: 4401-9400 Capsella grandiflora
Cagra.0154s0002 5.0kb downstream 5.0kb downstream 4400 true Scaffold154: 1-4400 Capsella grandiflora
Cagra.0154s0002 5.0kb downstream 5.0kb downstream 905 false Scaffold154: 1-905 Capsella grandiflora
Cagra.0154s0002 10.0kb upstream 10.0kb upstream 13495 true Scaffold154: 906-14400 Capsella grandiflora
Cagra.0154s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold154: 4401-14400 Capsella grandiflora
Cagra.0154s0002 10.0kb downstream 10.0kb downstream 4400 true Scaffold154: 1-4400 Capsella grandiflora
Cagra.0154s0002 10.0kb downstream 10.0kb downstream 905 false Scaffold154: 1-905 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360765 5261 Brassicaceae View MSA
123830631 5264 Brassicales-Malvales View MSA
124343533 5266 SBM View MSA
124237785 5268 Malvidae View MSA
124066433 5270 Rosid View MSA
123736830 5271 Pentapetalae View MSA
122788916 5272 Eudicot View MSA
122044484 5273 Angiosperm View MSA
121347112 5274 Embryophyte View MSA
123426433 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain