Gene : Cagra.0154s0010 C. grandiflora v1.1
Defline:  (1 of 1) PTHR32295:SF41 - CALMODULIN BINDING PROTEIN-RELATED Genomic Order:  10
Name:  ? Cagra.0154s0010 Secondary Identifier:  ? PAC:28919006
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0154s0010 0.5kb upstream 0.5kb upstream 2055 true Scaffold154: 22218-24272 Capsella grandiflora
Cagra.0154s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold154: 22218-22717 Capsella grandiflora
Cagra.0154s0010 0.5kb downstream 0.5kb downstream 2055 true Scaffold154: 22718-24772 Capsella grandiflora
Cagra.0154s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold154: 24273-24772 Capsella grandiflora
Cagra.0154s0010 1.0kb upstream 1.0kb upstream 2555 true Scaffold154: 21718-24272 Capsella grandiflora
Cagra.0154s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold154: 21718-22717 Capsella grandiflora
Cagra.0154s0010 1.0kb downstream 1.0kb downstream 2555 true Scaffold154: 22718-25272 Capsella grandiflora
Cagra.0154s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold154: 24273-25272 Capsella grandiflora
Cagra.0154s0010 2.0kb upstream 2.0kb upstream 3555 true Scaffold154: 20718-24272 Capsella grandiflora
Cagra.0154s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold154: 20718-22717 Capsella grandiflora
Cagra.0154s0010 2.0kb downstream 2.0kb downstream 3555 true Scaffold154: 22718-26272 Capsella grandiflora
Cagra.0154s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold154: 24273-26272 Capsella grandiflora
Cagra.0154s0010 5.0kb upstream 5.0kb upstream 6555 true Scaffold154: 17718-24272 Capsella grandiflora
Cagra.0154s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold154: 17718-22717 Capsella grandiflora
Cagra.0154s0010 5.0kb downstream 5.0kb downstream 6555 true Scaffold154: 22718-29272 Capsella grandiflora
Cagra.0154s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold154: 24273-29272 Capsella grandiflora
Cagra.0154s0010 10.0kb upstream 10.0kb upstream 11555 true Scaffold154: 12718-24272 Capsella grandiflora
Cagra.0154s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold154: 12718-22717 Capsella grandiflora
Cagra.0154s0010 10.0kb downstream 10.0kb downstream 11555 true Scaffold154: 22718-34272 Capsella grandiflora
Cagra.0154s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold154: 24273-34272 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376724 5261 Brassicaceae View MSA
123829263 5264 Brassicales-Malvales View MSA
124344034 5266 SBM View MSA
124238420 5268 Malvidae View MSA
124064694 5270 Rosid View MSA
123736555 5271 Pentapetalae View MSA
122794904 5272 Eudicot View MSA
122049723 5273 Angiosperm View MSA
121311558 5274 Embryophyte View MSA
123348838 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain