Gene : Cagra.0157s0013 C. grandiflora v1.1
Defline:  (1 of 5) PF04842 - Plant protein of unknown function (DUF639) (DUF639) Genomic Order:  13
Name:  ? Cagra.0157s0013 Secondary Identifier:  ? PAC:28915958
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0157s0013 0.5kb upstream 0.5kb upstream 3938 true Scaffold157: 35630-39567 Capsella grandiflora
Cagra.0157s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold157: 35630-36129 Capsella grandiflora
Cagra.0157s0013 0.5kb downstream 0.5kb downstream 3938 true Scaffold157: 36130-40067 Capsella grandiflora
Cagra.0157s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold157: 39568-40067 Capsella grandiflora
Cagra.0157s0013 1.0kb upstream 1.0kb upstream 4438 true Scaffold157: 35130-39567 Capsella grandiflora
Cagra.0157s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold157: 35130-36129 Capsella grandiflora
Cagra.0157s0013 1.0kb downstream 1.0kb downstream 4438 true Scaffold157: 36130-40567 Capsella grandiflora
Cagra.0157s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold157: 39568-40567 Capsella grandiflora
Cagra.0157s0013 2.0kb upstream 2.0kb upstream 5438 true Scaffold157: 34130-39567 Capsella grandiflora
Cagra.0157s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold157: 34130-36129 Capsella grandiflora
Cagra.0157s0013 2.0kb downstream 2.0kb downstream 5438 true Scaffold157: 36130-41567 Capsella grandiflora
Cagra.0157s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold157: 39568-41567 Capsella grandiflora
Cagra.0157s0013 5.0kb upstream 5.0kb upstream 8438 true Scaffold157: 31130-39567 Capsella grandiflora
Cagra.0157s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold157: 31130-36129 Capsella grandiflora
Cagra.0157s0013 5.0kb downstream 5.0kb downstream 8438 true Scaffold157: 36130-44567 Capsella grandiflora
Cagra.0157s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold157: 39568-44567 Capsella grandiflora
Cagra.0157s0013 10.0kb upstream 10.0kb upstream 13438 true Scaffold157: 26130-39567 Capsella grandiflora
Cagra.0157s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold157: 26130-36129 Capsella grandiflora
Cagra.0157s0013 10.0kb downstream 10.0kb downstream 11842 true Scaffold157: 36130-47971 Capsella grandiflora
Cagra.0157s0013 10.0kb downstream 10.0kb downstream 8404 false Scaffold157: 39568-47971 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366167 5261 Brassicaceae View MSA
123833851 5264 Brassicales-Malvales View MSA
124342878 5266 SBM View MSA
124237445 5268 Malvidae View MSA
124068443 5270 Rosid View MSA
123751321 5271 Pentapetalae View MSA
122787029 5272 Eudicot View MSA
122046429 5273 Angiosperm View MSA
121310602 5274 Embryophyte View MSA
123348045 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain