Gene : Cagra.0160s0007 C. grandiflora v1.1
Defline:  (1 of 2) PTHR32295:SF10 - CALMODULIN-BINDING FAMILY PROTEIN Genomic Order:  7
Name:  ? Cagra.0160s0007 Secondary Identifier:  ? PAC:28912553
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0160s0007 0.5kb upstream 0.5kb upstream 1752 true Scaffold160: 16312-18063 Capsella grandiflora
Cagra.0160s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold160: 17564-18063 Capsella grandiflora
Cagra.0160s0007 0.5kb downstream 0.5kb downstream 1752 true Scaffold160: 15812-17563 Capsella grandiflora
Cagra.0160s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold160: 15812-16311 Capsella grandiflora
Cagra.0160s0007 1.0kb upstream 1.0kb upstream 2252 true Scaffold160: 16312-18563 Capsella grandiflora
Cagra.0160s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold160: 17564-18563 Capsella grandiflora
Cagra.0160s0007 1.0kb downstream 1.0kb downstream 2252 true Scaffold160: 15312-17563 Capsella grandiflora
Cagra.0160s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold160: 15312-16311 Capsella grandiflora
Cagra.0160s0007 2.0kb upstream 2.0kb upstream 3252 true Scaffold160: 16312-19563 Capsella grandiflora
Cagra.0160s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold160: 17564-19563 Capsella grandiflora
Cagra.0160s0007 2.0kb downstream 2.0kb downstream 3252 true Scaffold160: 14312-17563 Capsella grandiflora
Cagra.0160s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold160: 14312-16311 Capsella grandiflora
Cagra.0160s0007 5.0kb upstream 5.0kb upstream 6252 true Scaffold160: 16312-22563 Capsella grandiflora
Cagra.0160s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold160: 17564-22563 Capsella grandiflora
Cagra.0160s0007 5.0kb downstream 5.0kb downstream 6252 true Scaffold160: 11312-17563 Capsella grandiflora
Cagra.0160s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold160: 11312-16311 Capsella grandiflora
Cagra.0160s0007 10.0kb upstream 10.0kb upstream 7231 true Scaffold160: 16312-23542 Capsella grandiflora
Cagra.0160s0007 10.0kb upstream 10.0kb upstream 5979 false Scaffold160: 17564-23542 Capsella grandiflora
Cagra.0160s0007 10.0kb downstream 10.0kb downstream 11252 true Scaffold160: 6312-17563 Capsella grandiflora
Cagra.0160s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold160: 6312-16311 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373153 5261 Brassicaceae View MSA
123838310 5264 Brassicales-Malvales View MSA
124349832 5266 SBM View MSA
124253281 5268 Malvidae View MSA
124070715 5270 Rosid View MSA
123748073 5271 Pentapetalae View MSA
122791637 5272 Eudicot View MSA
122049529 5273 Angiosperm View MSA
121311456 5274 Embryophyte View MSA
123348751 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain