Gene : Cagra.0133s0107 C. grandiflora v1.1
Defline:  (1 of 4) PTHR12549:SF16 - HISTONE H3MK9 DEMETHYLASE Genomic Order:  107
Name:  ? Cagra.0133s0107 Secondary Identifier:  ? PAC:28899408
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0133s0107 0.5kb upstream 0.5kb upstream 8688 true Scaffold133: 388449-397136 Capsella grandiflora
Cagra.0133s0107 0.5kb upstream 0.5kb upstream 500 false Scaffold133: 388449-388948 Capsella grandiflora
Cagra.0133s0107 0.5kb downstream 0.5kb downstream 8688 true Scaffold133: 388949-397636 Capsella grandiflora
Cagra.0133s0107 0.5kb downstream 0.5kb downstream 500 false Scaffold133: 397137-397636 Capsella grandiflora
Cagra.0133s0107 1.0kb upstream 1.0kb upstream 9188 true Scaffold133: 387949-397136 Capsella grandiflora
Cagra.0133s0107 1.0kb upstream 1.0kb upstream 1000 false Scaffold133: 387949-388948 Capsella grandiflora
Cagra.0133s0107 1.0kb downstream 1.0kb downstream 9188 true Scaffold133: 388949-398136 Capsella grandiflora
Cagra.0133s0107 1.0kb downstream 1.0kb downstream 1000 false Scaffold133: 397137-398136 Capsella grandiflora
Cagra.0133s0107 2.0kb upstream 2.0kb upstream 10188 true Scaffold133: 386949-397136 Capsella grandiflora
Cagra.0133s0107 2.0kb upstream 2.0kb upstream 2000 false Scaffold133: 386949-388948 Capsella grandiflora
Cagra.0133s0107 2.0kb downstream 2.0kb downstream 10188 true Scaffold133: 388949-399136 Capsella grandiflora
Cagra.0133s0107 2.0kb downstream 2.0kb downstream 2000 false Scaffold133: 397137-399136 Capsella grandiflora
Cagra.0133s0107 5.0kb upstream 5.0kb upstream 13188 true Scaffold133: 383949-397136 Capsella grandiflora
Cagra.0133s0107 5.0kb upstream 5.0kb upstream 5000 false Scaffold133: 383949-388948 Capsella grandiflora
Cagra.0133s0107 5.0kb downstream 5.0kb downstream 13188 true Scaffold133: 388949-402136 Capsella grandiflora
Cagra.0133s0107 5.0kb downstream 5.0kb downstream 5000 false Scaffold133: 397137-402136 Capsella grandiflora
Cagra.0133s0107 10.0kb upstream 10.0kb upstream 18188 true Scaffold133: 378949-397136 Capsella grandiflora
Cagra.0133s0107 10.0kb upstream 10.0kb upstream 10000 false Scaffold133: 378949-388948 Capsella grandiflora
Cagra.0133s0107 10.0kb downstream 10.0kb downstream 18188 true Scaffold133: 388949-407136 Capsella grandiflora
Cagra.0133s0107 10.0kb downstream 10.0kb downstream 10000 false Scaffold133: 397137-407136 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379744 5261 Brassicaceae View MSA
123837186 5264 Brassicales-Malvales View MSA
124350617 5266 SBM View MSA
124252655 5268 Malvidae View MSA
124073545 5270 Rosid View MSA
123747808 5271 Pentapetalae View MSA
122796242 5272 Eudicot View MSA
122050393 5273 Angiosperm View MSA
121349542 5274 Embryophyte View MSA
123425923 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain